C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156613 Zfp142-005 ENSMUSG00000026135 10090 - 1:74566683-74588246 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaENSMUST00000156613
Transcript ID Colon Liver Ovary Placenta
ENSMUST00000156613 0.927±0.08 0.388±0.00 1.907±0.44 0.819±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066C CIL_00066C_0002 CGP 1:74506058-74567794
CIL_0000AR CIL_0000AR_0003 CGP 1:74542888-74588246
CIL_0000AQ CIL_0000AQ_0003 CGP 1:74565127-74592443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411696 ZNF142-201 protein_coding Homo_sapiens 0 2477
ENST00000433921 ZNF142-004 nonsense_mediated_decay Homo_sapiens 0 2933
ENST00000440934 ZNF142-008 protein_coding Homo_sapiens 0 278
ENST00000449707 ZNF142-001 protein_coding Homo_sapiens 0 2477
ENST00000450765 ZNF142-002 nonsense_mediated_decay Homo_sapiens 0 2933

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