C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial transcription termination factor 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026273 Mterfd2 10090 - 1:93299211-93305915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027492 Mterfd2-001 93301205-93305915 protein_coding
  ENSMUST00000112942 Mterfd2-004 93301917-93305864 protein_coding
  ENSMUST00000112944 Mterfd2-002 93299211-93305863 protein_coding
  ENSMUST00000136754 Mterfd2-005 93301428-93302902 processed_transcript
  ENSMUST00000152307 Mterfd2-003 93303498-93305879 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027492ENSMUST00000112942ENSMUST00000112944
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027492 N/A N/A N/A 4.436±0.58 N/A N/A N/A N/A 6.078±1.01 N/A 2.522±0.38 N/A 8.650±2.46 7.629±1.20
ENSMUST00000112942 N/A N/A N/A N/A N/A N/A N/A N/A 1.237±0.05 N/A N/A N/A 1.192±0.00 N/A
ENSMUST00000112944 14.841±12.64 15.823±3.65 12.544±0.37 5.831±2.36 14.025±5.37 6.934±1.32 2.525±0.00 4.032±1.26 1.572±1.26 13.236±0.34 N/A 21.619±5.42 1.632±0.98 3.053±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UE CIL_0004UE_0003 CGP 1:93194049-93301065
CIL_0004GT CIL_0004GT_0002 CGP 1:93235841-93305915
CIL_000474 CIL_000474_0002 CGP 1:93299211-93343482

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005762 ISO mitochondrial large ribosomal subunit
GO:0006364 IEA rRNA processing
GO:0006390 IMP transcription from mitochondrial promoter
GO:0006626 IMP protein targeting to mitochondrion
GO:0007507 IMP heart development
GO:0019843 ISO rRNA binding
GO:0042255 IMP ribosome assembly
GO:0043010 IMP camera-type eye development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079124 MTERF4 mitochondrial transcription termination factor 4 protein_coding Danio_rerio
ENSG00000122085 MTERF4 mitochondrial transcription termination factor 4 protein_coding Homo_sapiens

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