C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial transcription termination factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027492 Mterfd2-001 ENSMUSG00000026273 10090 - 1:93301205-93305915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMusclePlacentaTestisENSMUST00000027492
Transcript ID Brain Liver Muscle Placenta Testis
ENSMUST00000027492 4.436±0.58 6.078±1.01 2.522±0.38 8.650±2.46 7.629±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UE CIL_0004UE_0003 CGP 1:93194049-93301065
CIL_0004GT CIL_0004GT_0002 CGP 1:93235841-93305915
CIL_000474 CIL_000474_0002 CGP 1:93299211-93343482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005762 ISO mitochondrial large ribosomal subunit
GO:0006364 IEA rRNA processing
GO:0006390 IMP transcription from mitochondrial promoter
GO:0006626 IMP protein targeting to mitochondrion
GO:0007507 IMP heart development
GO:0019843 ISO rRNA binding
GO:0042255 IMP ribosome assembly
GO:0043010 IMP camera-type eye development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241527 MTERF4-002 nonsense_mediated_decay Homo_sapiens 0 601
ENST00000391980 MTERF4-001 protein_coding Homo_sapiens 0 601
ENST00000406593 MTERF4-017 protein_coding Homo_sapiens 0 398
ENST00000439144 MTERF4-021 protein_coding Homo_sapiens 0 396
ENST00000614476 MTERF4-201 protein_coding Homo_sapiens 0 601

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