C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000474_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122085-ENSG00000115687 CGP 9606 2:241072169-241150264
GeneTranscriptPositionBiotype
ENSG00000115685 (PPP1R7)
protein phosphatase 1, regulatory subunit 7 		ENST00000234038 (PPP1R7-001) 241150022-241183652 protein_coding
ENST00000272983 (PPP1R7-005) 241149658-241182985 protein_coding
ENST00000401987 (PPP1R7-019) 241150496-241167174 protein_coding
ENST00000402734 (PPP1R7-009) 241149592-241167172 protein_coding
ENST00000404405 (PPP1R7-006) 241150418-241167174 protein_coding
ENST00000406106 (PPP1R7-002) 241150480-241167174 protein_coding
ENST00000407025 (PPP1R7-003) 241149638-241183024 protein_coding
ENST00000415769 (PPP1R7-023) 241169798-241183652 protein_coding
ENST00000423280 (PPP1R7-010) 241149613-241182784 protein_coding
ENST00000427172 (PPP1R7-015) 241151474-241159303 protein_coding
ENST00000438799 (PPP1R7-004) 241149576-241169856 protein_coding
ENST00000439916 (PPP1R7-012) 241150467-241160433 protein_coding
ENST00000450367 (PPP1R7-007) 241153482-241182846 protein_coding
ENST00000467159 (PPP1R7-017) 241155018-241160421 processed_transcript
ENST00000473017 (PPP1R7-011) 241150467-241158807 retained_intron
ENST00000479821 (PPP1R7-022) 241166341-241169892 retained_intron
ENST00000485630 (PPP1R7-018) 241155073-241166439 processed_transcript
ENST00000491715 (PPP1R7-020) 241159137-241182740 retained_intron
ENST00000493374 (PPP1R7-014) 241150484-241158923 retained_intron
ENST00000498170 (PPP1R7-013) 241150483-241158794 retained_intron
ENSG00000122085 (MTERF4)
mitochondrial transcription termination factor 4 		ENST00000241527 (MTERF4-002) 241087094-241102295 nonsense_mediated_decay
ENST00000391980 (MTERF4-001) 241095566-241102332 protein_coding
ENST00000401626 (MTERF4-018) 241094406-241102287 protein_coding
ENST00000406593 (MTERF4-017) 241095869-241102299 protein_coding
ENST00000407095 (MTERF4-013) 241097187-241102311 protein_coding
ENST00000414146 (MTERF4-020) 241090006-241099426 protein_coding
ENST00000424798 (MTERF4-025) 241096601-241099894 protein_coding
ENST00000434791 (MTERF4-019) 241099399-241102192 protein_coding
ENST00000439144 (MTERF4-021) 241096140-241102293 protein_coding
ENST00000449133 (MTERF4-023) 241089169-241094376 protein_coding
ENST00000455202 (MTERF4-004) 241087225-241102331 processed_transcript
ENST00000460915 (MTERF4-010) 241096926-241102321 retained_intron
ENST00000464344 (MTERF4-009) 241072169-241102332 processed_transcript
ENST00000475860 (MTERF4-012) 241099168-241102314 retained_intron
ENST00000476564 (MTERF4-011) 241089041-241102320 retained_intron
ENST00000479205 (MTERF4-022) 241089267-241094432 processed_transcript
ENST00000480298 (MTERF4-014) 241088905-241102311 processed_transcript
ENST00000488567 (MTERF4-005) 241087204-241096070 processed_transcript
ENST00000493169 (MTERF4-008) 241089273-241102332 processed_transcript
ENST00000495694 (MTERF4-016) 241089225-241102309 protein_coding
ENST00000496878 (MTERF4-006) 241075054-241095673 retained_intron
ENST00000614476 (MTERF4-201) 241087099-241102295 protein_coding
ENSG00000162804 (SNED1)
sushi, nidogen and EGF-like domains 1 		ENST00000310397 (SNED1-001) 240998838-241095568 protein_coding
ENST00000342631 (SNED1-201) 241063378-241087461 protein_coding
ENST00000401644 (SNED1-008) 241037220-241051819 protein_coding
ENST00000401884 (SNED1-005) 240998838-241073986 protein_coding
ENST00000405547 (SNED1-004) 240998838-241095563 protein_coding
ENST00000420591 (SNED1-013) 241040116-241041362 protein_coding
ENST00000431690 (SNED1-009) 241037336-241050041 protein_coding
ENST00000466618 (SNED1-003) 241063378-241091853 retained_intron
ENST00000469006 (SNED1-010) 241048331-241053326 processed_transcript
ENST00000483962 (SNED1-011) 241051277-241052394 retained_intron
ENST00000491761 (SNED1-006) 241071406-241075605 retained_intron
ENST00000493358 (SNED1-007) 241035534-241040381 processed_transcript
ENSG00000235861 (AC005237.2)
 ENST00000434368 (AC005237.2-001) 241118725-241118943 processed_pseudogene
CIL_000474_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026273-ENSMUSG00000026274 CGP 10090 1:93299211-93343482
GeneTranscriptPositionBiotype
ENSMUSG00000026273 (Mterfd2)
mitochondrial transcription termination factor 4 		ENSMUST00000027492 (Mterfd2-001) 93301205-93305915 protein_coding
ENSMUST00000112942 (Mterfd2-004) 93301917-93305864 protein_coding
ENSMUST00000112944 (Mterfd2-002) 93299211-93305863 protein_coding
ENSMUST00000136754 (Mterfd2-005) 93301428-93302902 processed_transcript
ENSMUST00000152307 (Mterfd2-003) 93303498-93305879 retained_intron
ENSMUSG00000026274 (Pask)
PAS domain containing serine/threonine kinase 		ENSMUST00000027493 (Pask-001) 93308778-93342789 protein_coding
ENSMUST00000128253 (Pask-003) 93337449-93343482 protein_coding
ENSMUST00000128655 (Pask-004) 93308770-93317413 retained_intron
ENSMUST00000133886 (Pask-005) 93309838-93313148 retained_intron
ENSMUST00000139028 (Pask-002) 93317828-93343465 retained_intron
ENSMUST00000148355 (Pask-006) 93310085-93311344 retained_intron
ENSMUSG00000026275 (Ppp1r7)
protein phosphatase 1, regulatory (inhibitor) subunit 7 		ENSMUST00000027494 (Ppp1r7-001) 93342854-93373489 protein_coding
ENSMUST00000127141 (Ppp1r7-002) 93343707-93352580 nonsense_mediated_decay
ENSMUST00000185498 (Ppp1r7-003) 93343655-93352649 protein_coding
ENSMUSG00000047793 (Sned1)
sushi, nidogen and EGF-like domains 1 		ENSMUST00000062202 (Sned1-001) 93235841-93301065 protein_coding
ENSMUST00000163688 (Sned1-004) 93281237-93295787 protein_coding
ENSMUST00000165843 (Sned1-006) 93274431-93282317 processed_transcript
ENSMUST00000165883 (Sned1-007) 93295695-93296598 retained_intron
ENSMUST00000168122 (Sned1-005) 93286842-93296476 retained_intron
ENSMUST00000172289 (Sned1-002) 93235851-93284507 retained_intron
ENSMUSG00000100351 (RP23-110B5.4)
predicted gene 7867 		ENSMUST00000189856 (RP23-110B5.4-001) 93306694-93307239 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000474_0001ENSG00000115685ENST00000234038ENST00000272983ENST00000401987ENST00000406106ENST00000407025ENST00000423280ENST00000427172ENST00000438799ENST00000450367ENST00000479821ENSG00000122085ENST00000241527ENST00000391980ENST00000406593ENST00000455202ENST00000464344ENST00000479205ENST00000488567ENST00000496878ENST00000614476ENSG00000162804ENST00000310397ENST00000405547ENST00000466618ENSG00000235861ENST00000434368CIL_000474_0002ENSMUSG00000026273ENSMUST00000027492ENSMUST00000112942ENSMUST00000112944ENSMUSG00000026274ENSMUST00000027493ENSMUST00000139028ENSMUSG00000026275ENSMUST00000027494ENSMUST00000127141ENSMUSG00000047793ENSMUST00000062202ENSMUST00000163688ENSMUST00000172289ENSMUSG00000100351ENSMUST00000189856
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115685 ENST00000234038 N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000272983 N/A N/A N/A 3.225±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401987 13.632±0.00 16.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A
ENST00000402734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406106 N/A N/A 2.669±0.00 7.997±0.00 9.448±6.86 8.400±4.98 4.929±2.67 4.116±0.00 6.548±3.33 19.063±0.00 N/A 12.717±4.23 11.859±0.59 N/A
ENST00000407025 17.096±0.00 16.939±0.00 N/A 17.989±14.10 11.266±9.25 24.273±0.00 10.993±0.00 29.015±0.00 8.196±5.30 11.418±10.06 13.053±12.05 31.068±15.60 22.878±6.95 78.346±12.52
ENST00000415769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423280 N/A N/A N/A 5.377±0.00 N/A N/A N/A N/A N/A N/A N/A 18.895±0.00 14.446±0.00 75.068±0.00
ENST00000427172 N/A N/A 3.924±0.00 N/A N/A N/A N/A 2.769±0.00 N/A N/A N/A 31.996±0.00 28.678±0.00 163.876±0.00
ENST00000438799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 13.450±0.00 N/A N/A
ENST00000439916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450367 13.703±0.00 18.635±0.00 N/A 22.762±14.75 12.054±0.00 8.999±4.80 6.540±4.72 11.287±9.91 4.645±2.70 8.297±5.41 13.903±12.37 4.286±0.00 N/A 81.870±0.00
ENST00000467159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.784±0.00 N/A N/A N/A
ENST00000485630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000122085 ENST00000241527 N/A N/A N/A N/A N/A 1.382±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391980 7.024±0.00 7.085±0.00 1.387±0.00 2.695±0.74 8.803±0.00 N/A 2.813±1.77 3.142±1.36 2.113±0.20 N/A 8.845±0.00 11.826±0.00 4.016±1.44 N/A
ENST00000401626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406593 N/A 14.709±0.00 N/A 3.243±0.00 N/A N/A 2.121±0.00 4.530±0.00 N/A N/A N/A 6.310±1.69 7.184±2.17 9.386±0.00
ENST00000407095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455202 N/A N/A N/A N/A N/A N/A N/A 2.405±0.00 1.519±0.00 N/A N/A 3.158±0.00 N/A 5.028±0.00
ENST00000460915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464344 N/A N/A N/A N/A 1.346±0.00 0.947±0.00 N/A N/A 1.265±0.00 1.414±0.00 N/A 1.199±0.00 N/A N/A
ENST00000475860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.611±0.00 N/A N/A N/A
ENST00000480298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488567 N/A 2.622±0.00 N/A 2.032±0.00 2.457±1.00 1.780±0.00 N/A N/A 0.892±0.00 N/A N/A 3.164±1.60 N/A 7.315±0.00
ENST00000493169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496878 N/A N/A N/A N/A N/A N/A N/A 2.306±0.00 N/A N/A 0.709±0.00 N/A N/A N/A
ENST00000614476 N/A N/A N/A N/A N/A N/A N/A N/A 1.074±0.00 1.129±0.00 N/A N/A N/A N/A
ENSG00000162804 ENST00000310397 2.866±0.00 N/A 0.540±0.00 1.004±0.55 3.586±0.00 1.267±0.70 1.697±0.00 1.140±0.00 0.706±0.00 2.696±1.40 3.499±0.00 2.949±2.14 0.450±0.00 2.905±0.00
ENST00000342631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000401884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405547 N/A N/A N/A N/A N/A 1.309±0.00 N/A 0.729±0.00 0.622±0.00 N/A N/A N/A N/A N/A
ENST00000420591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.932±0.00 N/A N/A
ENST00000469006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235861 ENST00000434368 N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026273 ENSMUST00000027492 N/A N/A N/A 4.436±0.58 N/A N/A N/A N/A 6.078±1.01 N/A 2.522±0.38 N/A 8.650±2.46 7.629±1.20
ENSMUST00000112942 N/A N/A N/A N/A N/A N/A N/A N/A 1.237±0.05 N/A N/A N/A 1.192±0.00 N/A
ENSMUST00000112944 14.841±12.64 15.823±3.65 12.544±0.37 5.831±2.36 14.025±5.37 6.934±1.32 2.525±0.00 4.032±1.26 1.572±1.26 13.236±0.34 N/A 21.619±5.42 1.632±0.98 3.053±0.44
ENSMUST00000136754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026274 ENSMUST00000027493 0.769±0.00 0.612±0.02 N/A 4.279±0.00 0.473±0.00 0.776±0.18 N/A N/A 3.042±1.41 N/A N/A 1.162±0.18 1.609±0.30 12.611±3.41
ENSMUST00000128253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139028 N/A 0.740±0.05 N/A 1.456±0.00 0.585±0.00 N/A N/A N/A 1.481±0.00 N/A N/A 1.954±0.38 N/A 3.050±0.08
ENSMUST00000148355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026275 ENSMUST00000027494 2.422±0.13 1.532±0.97 5.034±0.01 6.133±0.25 1.079±0.54 1.967±0.62 1.485±0.07 1.960±0.37 2.766±1.69 2.436±0.28 1.900±0.09 2.737±0.87 1.872±0.56 3.834±1.57
ENSMUST00000127141 N/A N/A N/A 63.334±0.00 N/A N/A N/A N/A N/A N/A N/A 49.417±0.00 37.860±10.93 84.456±0.00
ENSMUST00000185498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047793 ENSMUST00000062202 8.824±6.31 4.373±0.78 4.516±0.60 2.154±1.36 5.213±1.38 2.300±0.67 1.710±0.25 1.886±0.71 0.557±0.46 6.248±0.54 0.783±0.15 7.457±1.62 0.529±0.33 1.062±0.34
ENSMUST00000163688 N/A 4.934±0.00 N/A N/A N/A N/A 3.532±0.00 N/A N/A N/A N/A 10.706±0.84 N/A N/A
ENSMUST00000165843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172289 N/A 2.599±0.25 N/A N/A N/A 1.564±0.16 N/A 1.286±0.00 1.200±0.00 5.061±0.43 N/A 5.697±1.46 N/A 0.848±0.00
ENSMUSG00000100351 ENSMUST00000189856 0.287±0.04 N/A 0.248±0.06 0.792±0.29 0.256±0.10 0.267±0.01 0.099±0.00 0.229±0.02 0.277±0.09 0.194±0.00 0.087±0.00 0.348±0.18 0.232±0.08 0.550±0.14

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