C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007TZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs522 VISTA 9606 2:120774842-121375741
GeneTranscriptPositionBiotype
ENSG00000074054 (CLASP1)
cytoplasmic linker associated protein 1 		ENST00000263710 (CLASP1-201) 121337776-121649476 protein_coding
ENST00000397587 (CLASP1-202) 121337776-121649476 protein_coding
ENST00000409078 (CLASP1-001) 121337776-121649587 protein_coding
ENST00000418989 (CLASP1-012) 121460015-121505093 protein_coding
ENST00000430234 (CLASP1-014) 121458916-121490328 processed_transcript
ENST00000449975 (CLASP1-013) 121461109-121503988 protein_coding
ENST00000452274 (CLASP1-016) 121340722-121503220 nonsense_mediated_decay
ENST00000455322 (CLASP1-203) 121339990-121649438 protein_coding
ENST00000463621 (CLASP1-003) 121407519-121427470 retained_intron
ENST00000472776 (CLASP1-004) 121364119-121388076 retained_intron
ENST00000474065 (CLASP1-010) 121462532-121525967 retained_intron
ENST00000480007 (CLASP1-011) 121462535-121513073 processed_transcript
ENST00000485112 (CLASP1-009) 121515665-121530745 retained_intron
ENST00000491646 (CLASP1-015) 121459622-121461195 retained_intron
ENST00000541377 (CLASP1-204) 121337776-121649476 protein_coding
ENSG00000115112 (TFCP2L1)
transcription factor CP2-like 1 		ENST00000263707 (TFCP2L1-001) 121216587-121285207 protein_coding
ENST00000464621 (TFCP2L1-002) 121224164-121234274 retained_intron
ENSG00000236145 (AC079988.3)
 ENST00000432984 (AC079988.3-001) 121178327-121182580 lincRNA
ENSG00000271709 (RP11-297J22.1)
 ENST00000603720 (RP11-297J22.1-001) 120866378-120867403 lincRNA
CIL_0007TZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs522 VISTA 10090 1:118476526-119078049
GeneTranscriptPositionBiotype
ENSMUSG00000026380 (Tfcp2l1)
transcription factor CP2-like 1 		ENSMUST00000027629 (Tfcp2l1-001) 118627946-118685168 protein_coding
ENSMUST00000190652 (Tfcp2l1-002) 118627945-118637766 processed_transcript
ENSMUSG00000048402 (Gli2)
GLI-Kruppel family member GLI2 		ENSMUST00000062483 (Gli2-001) 118834132-119053619 protein_coding
ENSMUST00000159678 (Gli2-009) 118868042-118982588 processed_transcript
ENSMUST00000159839 (Gli2-007) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000160991 (Gli2-006) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000161056 (Gli2-005) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000161301 (Gli2-002) 118848460-119053339 protein_coding
ENSMUST00000161451 (Gli2-004) 118848462-119053339 protein_coding
ENSMUST00000162552 (Gli2-003) 118848460-119053339 nonsense_mediated_decay
ENSMUST00000162607 (Gli2-008) 118848462-119053339 protein_coding
ENSMUSG00000064302 (Clasp1)
CLIP associating protein 1 		ENSMUST00000049404 (Clasp1-201) 118389058-118609432 protein_coding
ENSMUST00000070989 (Clasp1-202) 118389058-118609432 protein_coding
ENSMUST00000165223 (Clasp1-203) 118389058-118609432 protein_coding
ENSMUST00000178710 (Clasp1-204) 118389058-118609432 protein_coding
ENSMUST00000185405 (Clasp1-009) 118389455-118607165 protein_coding
ENSMUST00000186349 (Clasp1-011) 118419560-118608492 protein_coding
ENSMUST00000187575 (Clasp1-015) 118604727-118608205 retained_intron
ENSMUST00000187713 (Clasp1-010) 118389456-118607165 protein_coding
ENSMUST00000188441 (Clasp1-017) 118547211-118547930 retained_intron
ENSMUST00000188710 (Clasp1-013) 118419724-118612678 protein_coding
ENSMUST00000189216 (Clasp1-016) 118510237-118525873 retained_intron
ENSMUST00000189262 (Clasp1-003) 118389455-118608492 protein_coding
ENSMUST00000189384 (Clasp1-014) 118534766-118537490 retained_intron
ENSMUST00000189570 (Clasp1-004) 118389456-118607739 protein_coding
ENSMUST00000189676 (Clasp1-002) 118389344-118503213 retained_intron
ENSMUST00000189738 (Clasp1-007) 118419440-118607739 protein_coding
ENSMUST00000190135 (Clasp1-006) 118389457-118507576 retained_intron
ENSMUST00000190571 (Clasp1-001) 118419724-118608492 protein_coding
ENSMUST00000190733 (Clasp1-008) 118389446-118607165 nonsense_mediated_decay
ENSMUST00000191445 (Clasp1-005) 118389473-118607165 protein_coding
ENSMUSG00000097408 (Gm26831)
predicted gene, 26831 		ENSMUST00000181458 (Gm26831-001) 119058469-119059848 lincRNA
ENSMUSG00000100040 (RP23-353I19.3)
predicted gene 28467 		ENSMUST00000190981 (RP23-353I19.3-001) 118810136-118810453 processed_pseudogene
ENSMUSG00000100770 (RP24-553C6.2)
predicted gene 28466 		ENSMUST00000190678 (RP24-553C6.2-001) 118478604-118479591 processed_pseudogene
ENSMUSG00000101624 (RP24-236C22.2)
predicted gene 28882 		ENSMUST00000185504 (RP24-236C22.2-001) 118651482-118651795 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TZ_0001ENSG00000074054ENST00000263710ENST00000397587ENST00000409078ENST00000418989ENST00000430234ENST00000449975ENST00000452274ENST00000455322ENST00000463621ENST00000472776ENST00000474065ENST00000480007ENST00000485112ENST00000491646ENST00000541377ENSG00000115112ENST00000263707ENST00000464621ENSG00000236145ENST00000432984ENSG00000271709ENST00000603720CIL_0007TZ_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007TZ_0001ENSG00000074054ENST00000263710ENST00000397587ENST00000409078ENST00000452274ENST00000455322ENST00000541377ENSG00000115112ENST00000263707ENSG00000236145ENST00000432984ENSG00000271709ENST00000603720CIL_0007TZ_0002ENSMUSG00000026380ENSMUST00000027629ENSMUST00000190652ENSMUSG00000048402ENSMUST00000062483ENSMUST00000159678ENSMUST00000161451ENSMUST00000162607ENSMUSG00000064302ENSMUST00000049404ENSMUST00000070989ENSMUST00000165223ENSMUST00000178710ENSMUST00000188710ENSMUST00000189570ENSMUST00000189738ENSMUST00000190733ENSMUST00000191445ENSMUSG00000097408ENSMUST00000181458ENSMUSG00000100040ENSMUST00000190981ENSMUSG00000100770ENSMUST00000190678ENSMUSG00000101624ENSMUST00000185504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074054 ENST00000263710 N/A N/A N/A 2.256±0.94 N/A N/A N/A 0.903±0.00 N/A 0.665±0.00 N/A N/A N/A N/A
ENST00000397587 N/A N/A N/A N/A N/A N/A N/A 3.169±0.00 N/A N/A 3.243±0.00 N/A N/A N/A
ENST00000409078 1.227±0.00 N/A 0.802±0.00 1.075±0.00 N/A N/A 1.752±0.00 N/A N/A 1.017±0.00 N/A 1.237±0.00 1.471±0.83 N/A
ENST00000418989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.683±0.00
ENST00000455322 N/A N/A N/A 3.393±0.00 3.876±0.00 2.953±0.00 4.045±0.00 N/A 3.154±0.00 2.104±0.00 2.059±0.00 2.834±0.94 N/A 2.273±0.00
ENST00000463621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541377 2.479±0.00 1.497±0.00 2.203±0.00 2.589±0.22 2.073±0.97 1.839±0.21 3.827±1.91 1.438±0.13 2.552±1.47 1.755±0.17 3.683±0.00 1.667±0.47 0.709±0.19 1.958±0.00
ENSG00000115112 ENST00000263707 0.086±0.00 N/A 15.799±0.00 0.129±0.07 1.149±0.15 3.704±3.39 0.054±0.04 9.684±9.59 0.184±0.12 0.469±0.31 0.064±0.00 3.136±3.03 3.806±2.20 0.569±0.26
ENST00000464621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236145 ENST00000432984 0.117±0.00 0.097±0.00 N/A 0.146±0.00 N/A 0.022±0.00 N/A 0.408±0.00 0.043±0.00 N/A N/A 0.045±0.01 N/A 0.087±0.02
ENSG00000271709 ENST00000603720 N/A N/A N/A N/A N/A 0.117±0.00 N/A 0.063±0.00 0.260±0.23 0.587±0.00 0.101±0.00 0.372±0.44 0.102±0.01 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026380 ENSMUST00000027629 3.700±3.56 0.174±0.07 2.549±0.13 0.159±0.04 1.480±0.39 47.845±6.83 0.104±0.05 38.977±6.21 1.240±0.61 9.874±0.07 2.672±1.11 3.808±1.48 0.984±0.74 0.970±0.67
ENSMUST00000190652 N/A 0.379±0.16 N/A N/A N/A 69.506±3.71 N/A N/A N/A N/A N/A 8.305±2.33 N/A N/A
ENSMUSG00000048402 ENSMUST00000062483 2.389±1.69 0.277±0.16 1.758±0.32 1.811±1.20 0.883±0.17 0.707±0.33 0.302±0.12 0.030±0.00 0.042±0.05 0.729±0.40 0.092±0.02 2.967±1.55 0.354±0.13 0.254±0.00
ENSMUST00000159678 N/A N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000159839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161451 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 0.054±0.00 N/A N/A N/A N/A 0.313±0.00
ENSMUST00000162552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162607 N/A N/A N/A N/A N/A N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000064302 ENSMUST00000049404 N/A N/A N/A 9.568±2.35 N/A N/A N/A N/A 0.223±0.00 N/A N/A N/A N/A N/A
ENSMUST00000070989 N/A N/A N/A 6.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165223 2.008±0.67 0.998±0.27 4.760±0.83 N/A 2.342±0.88 1.516±0.34 N/A 1.692±0.60 1.358±0.90 2.755±0.32 2.862±0.38 3.012±2.42 3.394±1.56 N/A
ENSMUST00000178710 4.646±1.05 4.729±0.68 3.042±0.61 16.699±0.00 3.999±1.10 3.149±0.40 39.673±3.79 2.202±0.42 1.348±0.54 4.644±0.69 2.366±0.44 6.049±0.71 1.432±0.58 3.932±1.20
ENSMUST00000185405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188710 0.446±0.00 N/A 0.646±0.00 N/A N/A N/A N/A 0.394±0.00 0.319±0.10 0.674±0.00 0.885±0.10 0.761±0.00 0.331±0.00 N/A
ENSMUST00000189216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.258±0.00 4.348±0.00 1.759±0.05 N/A
ENSMUST00000189676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189738 N/A N/A N/A 13.519±0.00 N/A N/A N/A N/A N/A N/A N/A 3.843±0.35 2.626±1.01 5.301±0.00
ENSMUST00000190135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.892±1.56
ENSMUST00000191445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.47
ENSMUSG00000097408 ENSMUST00000181458 0.062±0.03 0.065±0.00 0.095±0.01 0.188±0.13 N/A 0.071±0.00 0.022±0.00 0.029±0.00 0.012±0.00 0.039±0.01 0.030±0.01 0.078±0.07 0.045±0.02 0.027±0.00
ENSMUSG00000100040 ENSMUST00000190981 N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100770 ENSMUST00000190678 0.176±0.07 0.387±0.18 0.062±0.00 0.361±0.00 0.498±0.07 0.183±0.00 0.298±0.10 0.127±0.09 0.128±0.06 0.116±0.02 N/A 0.438±0.28 0.066±0.00 0.163±0.09
ENSMUSG00000101624 ENSMUST00000185504 0.598±0.00 N/A 0.054±0.00 N/A N/A 0.380±0.03 N/A 0.501±0.19 N/A 0.510±0.01 N/A 0.700±0.00 0.061±0.00 N/A

Loading