C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cornichon homolog 3 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026514 Cnih3 10090 + 1:181352628-181460641 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027795 Cnih3-002 181352630-181460641 protein_coding
  ENSMUST00000161880 Cnih3-001 181352628-181459909 protein_coding
  ENSMUST00000162685 Cnih3-003 181353198-181459287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000027795ENSMUST00000161880ENSMUST00000162685
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000027795 0.010±0.00 0.022±0.00 0.003±0.00 3.163±0.53 0.069±0.02 N/A 0.010±0.00 0.022±0.00 0.009±0.00 N/A N/A N/A N/A
ENSMUST00000161880 0.025±0.01 0.054±0.00 0.053±0.00 11.410±0.00 0.091±0.02 0.042±0.01 0.027±0.00 N/A 0.012±0.01 0.065±0.01 0.073±0.02 0.019±0.02 0.065±0.04
ENSMUST00000162685 0.049±0.00 N/A N/A 34.517±0.00 N/A N/A N/A N/A 0.089±0.07 0.040±0.00 N/A 0.071±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0002 VISTA 1:180955937-181559663
CIL_0005S2 CIL_0005S2_0002 CGP 1:181173228-181460641

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016247 IEA channel regulator activity
GO:0030054 IEA cell junction
GO:0032281 ISS alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035556 IEA intracellular signal transduction
GO:0042391 IEA regulation of membrane potential
GO:0043198 ISS dendritic shaft
GO:0045211 ISS postsynaptic membrane
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014953 cnih3 cornichon homolog 3 (Drosophila) protein_coding Danio_rerio
ENSG00000143786 CNIH3 cornichon family AMPA receptor auxiliary protein 3 protein_coding Homo_sapiens

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