C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027795 Cnih3-002 ENSMUSG00000026514 10090 + 1:181352630-181460641 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverENSMUST00000027795
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver
ENSMUST00000027795 0.010±0.00 0.022±0.00 0.003±0.00 3.163±0.53 0.069±0.02 0.010±0.00 0.022±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0002 VISTA 1:180955937-181559663
CIL_0005S2 CIL_0005S2_0002 CGP 1:181173228-181460641

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030054 IEA cell junction
GO:0032281 ISS alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0035556 IEA intracellular signal transduction
GO:0043198 ISS dendritic shaft
GO:0045211 ISS postsynaptic membrane
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272133 CNIH3-001 protein_coding Homo_sapiens 0 682
ENST00000478120 CNIH3-003 processed_transcript Homo_sapiens 0 508
ENST00000481095 CNIH3-004 processed_transcript Homo_sapiens 0 497
ENST00000498382 CNIH3-002 processed_transcript Homo_sapiens 0 534

Loading