C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon homolog 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161880 Cnih3-001 ENSMUSG00000026514 10090 + 1:181352628-181459909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000161880
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000161880 0.025±0.01 0.054±0.00 0.053±0.00 11.410±0.00 0.091±0.02 0.042±0.01 0.027±0.00 0.012±0.01 0.065±0.01 0.073±0.02 0.019±0.02 0.065±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0002 VISTA 1:180955937-181559663
CIL_0005S2 CIL_0005S2_0002 CGP 1:181173228-181460641

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016247 IEA channel regulator activity
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035556 IEA intracellular signal transduction
GO:0042391 IEA regulation of membrane potential
GO:0043198 IEA dendritic shaft
GO:0045211 IEA postsynaptic membrane
GO:2000311 IEA regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272133 CNIH3-001 protein_coding Homo_sapiens 0 394
ENST00000478120 CNIH3-003 processed_transcript Homo_sapiens 0 368
ENST00000481095 CNIH3-004 processed_transcript Homo_sapiens 0 357
ENST00000498382 CNIH3-002 processed_transcript Homo_sapiens 0 394

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