C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: estrogen-related receptor gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026610 Esrrg 10090 + 1:187608791-188214885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027906 Esrrg-001 187997827-188214885 protein_coding
  ENSMUST00000110938 Esrrg-002 187997868-188214884 protein_coding
  ENSMUST00000110939 Esrrg-003 187609029-188214386 protein_coding
  ENSMUST00000127489 Esrrg-004 187608791-188043502 protein_coding
  ENSMUST00000152927 Esrrg-005 187609696-187793742 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027906ENSMUST00000110938ENSMUST00000110939ENSMUST00000127489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027906 0.132±0.00 1.097±0.55 0.044±0.00 4.166±2.47 N/A N/A 1.363±0.26 1.752±0.00 0.087±0.07 0.361±0.04 N/A 0.030±0.00 0.088±0.00 N/A
ENSMUST00000110938 N/A 1.579±0.44 N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A N/A 0.790±0.15 N/A N/A
ENSMUST00000110939 0.244±0.12 1.562±0.73 0.138±0.03 4.003±1.27 0.980±0.34 1.769±0.32 6.668±0.23 11.946±1.62 0.470±0.43 0.611±0.24 1.135±0.43 0.898±0.45 0.089±0.10 0.177±0.11
ENSMUST00000127489 0.256±0.00 4.706±0.00 N/A N/A 1.557±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JY CIL_0007JY_0002 UCNEbase 1:186701249-188943182

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 NAS DNA binding
GO:0003707 IEA steroid hormone receptor activity
GO:0003708 IEA retinoic acid receptor activity
GO:0004879 NAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005496 IEA steroid binding
GO:0005515 IPI protein binding
GO:0005516 NAS calmodulin binding
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0007275 NAS multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0048384 IEA retinoic acid receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004861 esrrga estrogen-related receptor gamma a protein_coding Danio_rerio
ENSDARG00000011696 esrrgb estrogen-related receptor gamma b protein_coding Danio_rerio
ENSG00000196482 ESRRG estrogen-related receptor gamma protein_coding Homo_sapiens

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