C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111594 Pigc-001 ENSMUSG00000026698 10090 + 1:161969186-161973435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000111594
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000111594 1.594±0.38 1.242±0.00 0.874±0.03 2.204±0.30 1.691±0.35 0.769±0.15 1.154±0.29 0.860±0.12 2.040±0.34 0.512±0.00 0.704±0.00 0.440±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0002 VISTA 1:161774031-162377560
CIL_0005CT CIL_0005CT_0002 CGP 1:161969186-162478034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0017176 IEA phosphatidylinositol N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344529 PIGC-001 protein_coding Homo_sapiens 0 1077
ENST00000367728 PIGC-004 protein_coding Homo_sapiens 0 1079
ENST00000478184 PIGC-008 processed_transcript Homo_sapiens 0 363
ENST00000527583 PIGCP1-001 processed_pseudogene Homo_sapiens 0 808

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