C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028021 Pigc-002 ENSMUSG00000026698 10090 + 1:161969188-161972330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028021
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028021 14.317±1.24 13.525±4.41 1.310±0.00 4.998±3.29 18.426±3.85 14.130±4.49 6.065±0.19 9.168±0.46 6.836±1.24 13.174±1.44 3.891±0.38 21.082±10.07 3.380±1.79 19.986±8.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0002 VISTA 1:161774031-162377560
CIL_0005CT CIL_0005CT_0002 CGP 1:161969186-162478034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0017176 IEA phosphatidylinositol N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344529 PIGC-001 protein_coding Homo_sapiens 0 1077
ENST00000367728 PIGC-004 protein_coding Homo_sapiens 0 1090
ENST00000478184 PIGC-008 processed_transcript Homo_sapiens 0 363
ENST00000527583 PIGCP1-001 processed_pseudogene Homo_sapiens 0 808

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