C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006BI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165996-ENSG00000136738 CGP 9606 10:17589032-17715914
GeneTranscriptPositionBiotype
ENSG00000260589 (STAM-AS1)
STAM antisense RNA 1 (head to head) 		ENST00000563601 (STAM-AS1-001) 17641284-17643878 antisense
ENSG00000280126 (AC069542.1)
 ENST00000624816 (AC069542.1-201) 17602916-17603127 pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006BI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063275-ENSMUSG00000026718 CGP 10090 2:13975563-14148338
GeneTranscriptPositionBiotype
ENSMUSG00000026718 (Stam)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 		ENSMUST00000028050 (Stam-002) 14074190-14142705 protein_coding
ENSMUST00000102960 (Stam-001) 14074100-14148338 protein_coding
ENSMUST00000128777 (Stam-004) 14130845-14133707 processed_transcript
ENSMUST00000131734 (Stam-007) 14134122-14141718 processed_transcript
ENSMUST00000138989 (Stam-005) 14074427-14129073 protein_coding
ENSMUST00000140694 (Stam-006) 14128337-14129168 processed_transcript
ENSMUST00000144944 (Stam-003) 14129051-14131390 processed_transcript
ENSMUST00000156901 (Stam-008) 14074108-14128613 processed_transcript
ENSMUSG00000063275 (Ptpla)
protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a 		ENSMUST00000074854 (Ptpla-201) 14026902-14056135 protein_coding
ENSMUST00000091429 (Ptpla-003) 14026831-14056020 protein_coding
ENSMUST00000114753 (Ptpla-001) 14026831-14056023 protein_coding
ENSMUST00000131730 (Ptpla-002) 13975563-14056020 processed_transcript
ENSMUSG00000086657 (Stamos)
signal transducing adaptor molecule (SH3 domain and ITAM motif) 1, opposite strand 		ENSMUST00000152524 (Stamos-001) 14070332-14073934 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BI_0001ENSG00000260589ENST00000563601ENSG00000280126ENST00000624816CIL_0006BI_0002ENSMUSG00000026718ENSMUST00000028050ENSMUST00000102960ENSMUST00000128777ENSMUST00000131734ENSMUST00000138989ENSMUST00000140694ENSMUST00000144944ENSMUST00000156901ENSMUSG00000063275ENSMUST00000074854ENSMUST00000091429ENSMUST00000114753ENSMUST00000131730ENSMUSG00000086657ENSMUST00000152524
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006BI_0001ENSG00000260589ENST00000563601ENSG00000280126ENST00000624816CIL_0006BI_0002ENSMUSG00000026718ENSMUST00000028050ENSMUST00000102960ENSMUST00000131734ENSMUST00000138989ENSMUST00000156901ENSMUSG00000063275ENSMUST00000074854ENSMUST00000091429ENSMUST00000114753ENSMUST00000131730ENSMUSG00000086657ENSMUST00000152524
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000260589 ENST00000563601 0.016±0.00 0.156±0.00 0.018±0.00 0.013±0.00 0.017±0.00 0.027±0.00 0.051±0.03 0.112±0.00 0.016±0.00 0.015±0.00 0.003±0.00 0.092±0.01 0.012±0.00 0.131±0.05
ENSG00000280126 ENST00000624816 N/A 1.125±0.00 N/A 0.355±0.00 0.104±0.00 N/A N/A N/A N/A N/A 0.093±0.00 0.361±0.00 N/A 0.196±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026718 ENSMUST00000028050 N/A N/A N/A 3.550±0.00 N/A N/A 0.668±0.00 N/A N/A N/A N/A N/A 2.506±0.39 1.835±0.00
ENSMUST00000102960 9.193±1.39 10.538±2.37 9.039±0.57 16.155±8.89 7.434±2.49 10.241±1.32 3.443±0.16 7.086±1.42 6.934±2.13 10.647±1.02 1.754±0.41 10.504±5.26 4.970±2.59 3.490±1.40
ENSMUST00000128777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131734 N/A N/A N/A 28.818±0.00 N/A N/A N/A N/A N/A N/A N/A 22.372±0.00 17.197±0.67 N/A
ENSMUST00000138989 N/A N/A N/A 14.493±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156901 N/A 21.078±2.60 N/A N/A N/A N/A N/A N/A 6.620±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000063275 ENSMUST00000074854 8.817±4.34 N/A 7.999±0.00 N/A 19.426±1.38 N/A 42.982±7.42 1.141±0.09 N/A 2.551±0.00 14.286±2.63 N/A N/A N/A
ENSMUST00000091429 21.379±2.30 31.409±3.53 43.626±7.73 9.717±7.77 15.243±6.88 48.290±6.18 9.273±2.15 11.988±2.59 22.723±11.07 14.275±3.71 N/A 35.095±13.71 11.422±5.76 21.369±9.81
ENSMUST00000114753 N/A 6.585±0.00 14.536±4.14 N/A N/A N/A 7.973±2.71 N/A N/A 2.156±0.52 52.794±7.05 9.074±2.34 N/A N/A
ENSMUST00000131730 5.473±0.00 N/A N/A 1.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086657 ENSMUST00000152524 0.661±0.07 0.111±0.00 1.319±0.10 0.451±0.04 0.560±0.39 0.654±0.16 0.141±0.09 1.133±0.25 0.723±0.45 0.295±0.14 0.135±0.07 0.779±0.58 0.579±0.15 19.079±3.01

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