C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin related protein 2/3 complex, subunit 5-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026755 Arpc5l 10090 + 2:39008076-39015877 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090993 Arpc5l-201 39008139-39015872 protein_coding
  ENSMUST00000112862 Arpc5l-001 39008076-39015877 protein_coding
  ENSMUST00000135049 Arpc5l-003 39010018-39015877 processed_transcript
  ENSMUST00000141467 Arpc5l-002 39008141-39015877 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090993ENSMUST00000112862ENSMUST00000135049ENSMUST00000141467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090993 16.107±2.13 46.035±8.77 28.179±4.71 25.503±6.21 41.112±21.31 26.462±4.03 19.278±1.29 17.516±4.33 15.872±7.14 19.343±2.32 61.954±4.41 29.694±5.85 26.203±5.53 32.729±11.87
ENSMUST00000112862 3.869±0.00 16.585±0.66 4.280±0.00 4.489±0.00 N/A 11.214±1.79 4.948±0.80 5.620±1.89 4.249±2.19 3.013±0.00 9.632±1.26 7.288±0.00 4.062±0.23 32.084±6.08
ENSMUST00000135049 1.933±0.67 N/A 2.807±0.68 3.066±1.29 3.923±0.62 N/A 0.870±0.05 1.139±0.09 2.214±0.85 2.262±0.45 N/A 2.558±0.39 1.915±0.32 N/A
ENSMUST00000141467 N/A 15.661±2.24 N/A N/A 15.621±0.00 N/A N/A N/A 3.115±0.55 N/A N/A 4.668±0.00 4.715±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075E CIL_00075E_0002 CGP 2:39001580-39015877
CIL_0002C7 CIL_0002C7_0003 CGP 2:39008076-39065541

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0008150 ND biological_process
GO:0030833 IEA regulation of actin filament polymerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035433 arpc5lb actin related protein 2/3 complex, subunit 5-like, b protein_coding Danio_rerio
ENSDARG00000041720 arpc5la actin related protein 2/3 complex, subunit 5-like, a protein_coding Danio_rerio
ENSG00000136950 ARPC5L actin related protein 2/3 complex, subunit 5-like protein_coding Homo_sapiens

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