C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 5-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090993 Arpc5l-201 ENSMUSG00000026755 10090 + 2:39008139-39015872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090993 16.107±2.13 46.035±8.77 28.179±4.71 25.503±6.21 41.112±21.31 26.462±4.03 19.278±1.29 17.516±4.33 15.872±7.14 19.343±2.32 61.954±4.41 29.694±5.85 26.203±5.53 32.729±11.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075E CIL_00075E_0002 CGP 2:39001580-39015877
CIL_0002C7 CIL_0002C7_0003 CGP 2:39008076-39065541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005925 IEA focal adhesion
GO:0008150 ND biological_process
GO:0030833 IEA regulation of actin filament polymerization
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259477 ARPC5L-001 protein_coding Homo_sapiens 0 1020
ENST00000353214 ARPC5L-002 protein_coding Homo_sapiens 0 1020
ENST00000465124 ARPC5L-003 processed_transcript Homo_sapiens 0 736

Loading