C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 5-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112862 Arpc5l-001 ENSMUSG00000026755 10090 + 2:39008076-39015877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112862
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112862 3.869±0.00 16.585±0.66 4.280±0.00 4.489±0.00 11.214±1.79 4.948±0.80 5.620±1.89 4.249±2.19 3.013±0.00 9.632±1.26 7.288±0.00 4.062±0.23 32.084±6.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075E CIL_00075E_0002 CGP 2:39001580-39015877
CIL_0002C7 CIL_0002C7_0003 CGP 2:39008076-39065541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0030833 IEA regulation of actin filament polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259477 ARPC5L-001 protein_coding Homo_sapiens 0 1018
ENST00000353214 ARPC5L-002 protein_coding Homo_sapiens 0 1040
ENST00000465124 ARPC5L-003 processed_transcript Homo_sapiens 0 730

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