C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00075E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136942-ENSG00000136950 CGP 9606 9:124857880-124877733
GeneTranscriptPositionBiotype
ENSG00000136942 (RPL35)
ribosomal protein L35 		ENST00000348462 (RPL35-001) 124857884-124861961 protein_coding
ENST00000373570 (RPL35-005) 124857880-124861915 protein_coding
ENST00000487431 (RPL35-004) 124857883-124861936 retained_intron
ENST00000493018 (RPL35-003) 124857883-124861935 nonsense_mediated_decay
ENST00000495728 (RPL35-002) 124860979-124861981 retained_intron
ENSG00000136950 (ARPC5L)
actin related protein 2/3 complex, subunit 5-like 		ENST00000259477 (ARPC5L-001) 124869205-124877717 protein_coding
ENST00000353214 (ARPC5L-002) 124862130-124877733 protein_coding
ENST00000465124 (ARPC5L-003) 124872589-124877401 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00075E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062997-ENSMUSG00000026755 CGP 10090 2:39001580-39015877
GeneTranscriptPositionBiotype
ENSMUSG00000026755 (Arpc5l)
actin related protein 2/3 complex, subunit 5-like 		ENSMUST00000090993 (Arpc5l-201) 39008139-39015872 protein_coding
ENSMUST00000112862 (Arpc5l-001) 39008076-39015877 protein_coding
ENSMUST00000135049 (Arpc5l-003) 39010018-39015877 processed_transcript
ENSMUST00000141467 (Arpc5l-002) 39008141-39015877 processed_transcript
ENSMUSG00000035295 (Wdr38)
WD repeat domain 38 		ENSMUST00000039535 (Wdr38-003) 38997476-39006168 nonsense_mediated_decay
ENSMUST00000112872 (Wdr38-001) 38998319-39001582 protein_coding
ENSMUST00000124062 (Wdr38-002) 38998332-39000274 processed_transcript
ENSMUSG00000062997 (Rpl35)
ribosomal protein L35 		ENSMUST00000080861 (Rpl35-001) 39001580-39005624 protein_coding
ENSMUST00000126246 (Rpl35-002) 39004612-39005122 processed_transcript
ENSMUST00000152441 (Rpl35-003) 39001619-39005043 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075E_0001ENSG00000136942ENST00000348462ENST00000373570ENST00000487431ENST00000493018ENST00000495728ENSG00000136950ENST00000259477ENST00000353214ENST00000465124CIL_00075E_0002ENSMUSG00000026755ENSMUST00000090993ENSMUST00000112862ENSMUST00000135049ENSMUST00000141467ENSMUSG00000035295ENSMUST00000039535ENSMUST00000112872ENSMUST00000124062ENSMUSG00000062997ENSMUST00000080861ENSMUST00000126246ENSMUST00000152441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075E_0001ENSG00000136942ENST00000348462ENSG00000136950ENST00000259477ENST00000353214ENST00000465124CIL_00075E_0002ENSMUSG00000026755ENSMUST00000090993ENSMUST00000112862ENSMUST00000135049ENSMUST00000141467ENSMUSG00000035295ENSMUST00000039535ENSMUST00000112872ENSMUSG00000062997ENSMUST00000080861ENSMUST00000126246ENSMUST00000152441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136942 ENST00000348462 672.799±0.00 930.722±0.00 22.319±0.00 182.935±89.11 362.450±238.74 552.751±443.75 135.441±104.78 267.201±155.89 293.575±183.85 761.984±697.72 565.870±386.78 1208.662±676.99 1266.519±379.84 560.106±125.76
ENST00000373570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136950 ENST00000259477 17.491±0.00 37.180±0.00 1.356±0.00 22.558±18.59 18.517±0.00 9.759±8.16 18.561±0.00 13.141±12.49 17.744±0.00 20.458±20.34 7.172±5.58 35.257±38.60 40.334±14.63 71.257±27.44
ENST00000353214 N/A N/A N/A 0.582±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465124 N/A 7.308±0.00 N/A 0.539±0.00 1.064±0.00 0.576±0.00 N/A N/A N/A 0.105±0.00 N/A 0.616±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026755 ENSMUST00000090993 16.107±2.13 46.035±8.77 28.179±4.71 25.503±6.21 41.112±21.31 26.462±4.03 19.278±1.29 17.516±4.33 15.872±7.14 19.343±2.32 61.954±4.41 29.694±5.85 26.203±5.53 32.729±11.87
ENSMUST00000112862 3.869±0.00 16.585±0.66 4.280±0.00 4.489±0.00 N/A 11.214±1.79 4.948±0.80 5.620±1.89 4.249±2.19 3.013±0.00 9.632±1.26 7.288±0.00 4.062±0.23 32.084±6.08
ENSMUST00000135049 1.933±0.67 N/A 2.807±0.68 3.066±1.29 3.923±0.62 N/A 0.870±0.05 1.139±0.09 2.214±0.85 2.262±0.45 N/A 2.558±0.39 1.915±0.32 N/A
ENSMUST00000141467 N/A 15.661±2.24 N/A N/A 15.621±0.00 N/A N/A N/A 3.115±0.55 N/A N/A 4.668±0.00 4.715±0.00 N/A
ENSMUSG00000035295 ENSMUST00000039535 N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.235±15.97
ENSMUST00000124062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062997 ENSMUST00000080861 85.797±27.63 23.843±5.10 302.210±22.75 181.402±4.64 48.400±20.46 70.585±26.73 43.946±8.99 67.602±25.34 188.135±180.22 65.630±1.99 53.456±11.32 72.611±27.49 184.228±102.86 84.479±39.12
ENSMUST00000126246 N/A N/A N/A 265.015±0.00 26.149±0.00 321.618±7.99 N/A 199.054±0.00 60.762±11.26 N/A N/A 630.882±238.22 798.427±34.79 140.984±0.00
ENSMUST00000152441 N/A 19.264±9.67 N/A 52.504±0.00 8.078±0.00 N/A N/A N/A N/A N/A N/A 822.976±440.10 434.792±314.67 43.298±0.00

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