C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LY6/PLAUR domain containing 6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026765 Lypd6b 10090 + 2:49787688-49948849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028103 Lypd6b-001 49787688-49948849 protein_coding
  ENSMUST00000129867 Lypd6b-003 49840090-49942537 processed_transcript
  ENSMUST00000153422 Lypd6b-002 49787731-49930984 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028103ENSMUST00000129867ENSMUST00000153422
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028103 0.309±0.17 0.364±0.20 2.214±0.00 0.363±0.27 0.970±0.56 0.094±0.06 0.448±0.32 0.022±0.01 0.554±0.19 0.064±0.00 0.888±0.55 0.115±0.03 0.126±0.09
ENSMUST00000129867 N/A N/A N/A 0.619±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSMUST00000153422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MF CIL_0006MF_0002 CGP 2:49619298-49948849
CIL_0006MG CIL_0006MG_0002 CGP 2:49787688-50193569

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077643 lypd6b LY6/PLAUR domain containing 6B protein_coding Danio_rerio
ENSG00000150556 LYPD6B LY6/PLAUR domain containing 6B protein_coding Homo_sapiens

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