C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LY6/PLAUR domain containing 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028103 Lypd6b-001 ENSMUSG00000026765 10090 + 2:49787688-49948849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028103
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028103 0.309±0.17 0.364±0.20 2.214±0.00 0.363±0.27 0.970±0.56 0.094±0.06 0.448±0.32 0.022±0.01 0.554±0.19 0.064±0.00 0.888±0.55 0.115±0.03 0.126±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MF CIL_0006MF_0002 CGP 2:49619298-49948849
CIL_0006MG CIL_0006MG_0002 CGP 2:49787688-50193569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280115 LYPD6B-201 protein_coding Homo_sapiens 0 582
ENST00000409029 LYPD6B-003 protein_coding Homo_sapiens 0 582
ENST00000409642 LYPD6B-001 protein_coding Homo_sapiens 0 582
ENST00000409876 LYPD6B-002 protein_coding Homo_sapiens 0 582
ENST00000498249 LYPD6B-009 processed_transcript Homo_sapiens 0 582

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