C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006MG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150556-ENSG00000187123 CGP 9606 2:149038107-149474148
GeneTranscriptPositionBiotype
ENSG00000150556 (LYPD6B)
LY6/PLAUR domain containing 6B 		ENST00000280115 (LYPD6B-201) 149204525-149215258 protein_coding
ENST00000409029 (LYPD6B-003) 149077522-149215262 protein_coding
ENST00000409642 (LYPD6B-001) 149038467-149215262 protein_coding
ENST00000409876 (LYPD6B-002) 149038718-149215256 protein_coding
ENST00000437627 (LYPD6B-005) 149118181-149200708 nonsense_mediated_decay
ENST00000442722 (LYPD6B-006) 149119103-149208367 nonsense_mediated_decay
ENST00000450639 (LYPD6B-008) 149118196-149187635 protein_coding
ENST00000473800 (LYPD6B-007) 149038107-149101583 processed_transcript
ENST00000473975 (LYPD6B-010) 149118174-149205322 processed_transcript
ENST00000480545 (LYPD6B-004) 149118174-149131588 processed_transcript
ENST00000498249 (LYPD6B-009) 149142036-149215262 processed_transcript
ENSG00000187123 (LYPD6)
LY6/PLAUR domain containing 6 		ENST00000334166 (LYPD6-001) 149330537-149474148 protein_coding
ENST00000392854 (LYPD6-004) 149367712-149471110 nonsense_mediated_decay
ENST00000409381 (LYPD6-003) 149329985-149473623 protein_coding
ENST00000414420 (LYPD6-005) 149367701-149449090 protein_coding
ENST00000418762 (LYPD6-002) 149330663-149471095 nonsense_mediated_decay
ENSG00000223604 (AC007394.3)
 ENST00000421941 (AC007394.3-001) 149439897-149440427 processed_pseudogene
ENSG00000228236 (TXNP5)
thioredoxin pseudogene 5 		ENST00000441043 (TXNP5-001) 149068596-149068910 processed_pseudogene
CIL_0006MG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026765-ENSMUSG00000050447 CGP 10090 2:49787688-50193569
GeneTranscriptPositionBiotype
ENSMUSG00000026765 (Lypd6b)
LY6/PLAUR domain containing 6B 		ENSMUST00000028103 (Lypd6b-001) 49787688-49948849 protein_coding
ENSMUST00000129867 (Lypd6b-003) 49840090-49942537 processed_transcript
ENSMUST00000153422 (Lypd6b-002) 49787731-49930984 processed_transcript
ENSMUSG00000050447 (Lypd6)
LY6/PLAUR domain containing 6 		ENSMUST00000053208 (Lypd6-001) 50066464-50193564 protein_coding
ENSMUST00000112712 (Lypd6-201) 50066429-50193569 protein_coding
ENSMUST00000126337 (Lypd6-003) 50165401-50173694 protein_coding
ENSMUST00000128451 (Lypd6-002) 50066462-50190670 protein_coding
ENSMUST00000169232 (Lypd6-202) 50128369-50193563 protein_coding
ENSMUSG00000085357 (Gm13480)
predicted gene 13480 		ENSMUST00000125095 (Gm13480-001) 49805976-49812948 lincRNA
ENSMUSG00000088825 (Gm25223)
predicted gene, 25223 		ENSMUST00000158200 (Gm25223-201) 49906771-49906880 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MG_0001ENSG00000150556ENST00000280115ENST00000409029ENST00000409642ENST00000409876ENST00000437627ENST00000442722ENST00000450639ENST00000473800ENST00000473975ENST00000480545ENST00000498249ENSG00000187123ENST00000334166ENST00000392854ENST00000409381ENST00000414420ENST00000418762ENSG00000223604ENST00000421941ENSG00000228236ENST00000441043CIL_0006MG_0002ENSMUSG00000026765ENSMUST00000028103ENSMUST00000129867ENSMUST00000153422ENSMUSG00000050447ENSMUST00000053208ENSMUST00000112712ENSMUST00000126337ENSMUST00000128451ENSMUST00000169232ENSMUSG00000085357ENSMUST00000125095ENSMUSG00000088825ENSMUST00000158200
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006MG_0001ENSG00000150556ENST00000280115ENST00000409029ENST00000409642ENST00000409876ENST00000437627ENST00000450639ENST00000473800ENST00000480545ENST00000498249ENSG00000187123ENST00000334166ENST00000392854ENST00000409381ENST00000414420ENST00000418762ENSG00000223604ENST00000421941ENSG00000228236ENST00000441043CIL_0006MG_0002ENSMUSG00000026765ENSMUST00000028103ENSMUST00000129867ENSMUST00000153422ENSMUSG00000050447ENSMUST00000053208ENSMUST00000112712ENSMUST00000126337ENSMUST00000128451ENSMUST00000169232ENSMUSG00000085357ENSMUST00000125095ENSMUSG00000088825ENSMUST00000158200
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150556 ENST00000280115 0.246±0.00 N/A N/A 0.306±0.23 0.368±0.00 0.038±0.00 0.036±0.00 1.106±1.05 0.188±0.00 0.593±0.00 N/A 6.416±6.52 1.397±0.05 7.522±4.65
ENST00000409029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A
ENST00000409642 N/A 0.080±0.00 N/A 0.177±0.00 N/A N/A N/A 1.418±0.00 N/A N/A N/A 5.257±0.00 0.233±0.00 4.068±0.00
ENST00000409876 N/A N/A 0.409±0.00 0.453±0.00 0.333±0.00 N/A N/A 0.777±0.00 0.698±0.00 1.033±0.00 N/A 2.595±1.14 N/A 5.544±0.00
ENST00000437627 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000442722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450639 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.095±0.00 N/A N/A N/A N/A
ENST00000473800 N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480545 N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A
ENST00000498249 N/A 0.095±0.00 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187123 ENST00000334166 N/A 0.211±0.00 0.113±0.00 0.562±0.13 0.202±0.00 N/A N/A 0.335±0.00 0.222±0.14 0.075±0.00 N/A 0.246±0.10 2.266±0.76 0.183±0.00
ENST00000392854 N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409381 0.091±0.00 0.116±0.00 0.097±0.00 1.275±0.01 0.096±0.04 0.537±0.28 0.062±0.04 N/A 0.192±0.00 0.118±0.00 0.033±0.00 0.270±0.14 2.052±0.36 0.695±0.23
ENST00000414420 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A 0.848±0.00
ENST00000418762 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.628±0.00 N/A N/A N/A N/A N/A
ENSG00000223604 ENST00000421941 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A
ENSG00000228236 ENST00000441043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A 0.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026765 ENSMUST00000028103 0.309±0.17 0.364±0.20 N/A 2.214±0.00 0.363±0.27 0.970±0.56 0.094±0.06 0.448±0.32 0.022±0.01 0.554±0.19 0.064±0.00 0.888±0.55 0.115±0.03 0.126±0.09
ENSMUST00000129867 N/A N/A N/A N/A 0.619±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
ENSMUST00000153422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.08
ENSMUSG00000050447 ENSMUST00000053208 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.059±0.00 0.061±0.02
ENSMUST00000112712 0.470±0.39 4.527±0.97 0.970±0.24 1.715±0.79 0.251±0.15 0.560±0.28 0.095±0.09 0.914±0.33 0.072±0.04 0.601±0.20 0.291±0.05 0.943±0.38 0.312±0.13 0.154±0.07
ENSMUST00000126337 N/A N/A N/A N/A N/A N/A N/A 3.849±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000128451 1.449±1.25 28.340±4.82 N/A 2.727±0.00 0.926±0.23 1.820±0.69 0.431±0.00 3.099±0.87 0.193±0.05 1.145±0.49 0.609±0.00 4.001±1.76 0.617±0.11 0.744±0.20
ENSMUST00000169232 N/A N/A N/A 0.407±0.00 N/A 0.124±0.01 0.163±0.00 N/A 0.041±0.03 N/A N/A 0.486±0.00 0.121±0.03 0.072±0.00
ENSMUSG00000085357 ENSMUST00000125095 0.031±0.00 N/A 0.048±0.03 0.028±0.00 N/A 0.075±0.01 N/A 0.053±0.02 0.010±0.00 0.037±0.00 N/A 0.034±0.00 N/A 0.033±0.00
ENSMUSG00000088825 ENSMUST00000158200 N/A N/A N/A 17.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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