C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: speckle-type POZ protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132484 Spopl-001 ENSMUSG00000026771 10090 - 2:23506220-23572104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132484 0.706±0.39 0.970±0.10 1.292±0.27 1.775±0.84 0.682±0.43 0.671±0.13 0.407±0.00 0.400±0.09 1.403±0.79 1.886±0.25 1.477±0.50 0.901±0.28 0.780±0.35 0.391±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QJ CIL_0000QJ_0002 CGP 2:23321246-23572106
CIL_0000QI CIL_0000QI_0002 CGP 2:23506220-24049394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0016567 IEA protein ubiquitination
GO:0031397 ISS negative regulation of protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253815 UBE2D2-201 protein_coding Homo_sapiens 0 418
ENST00000280098 SPOPL-001 protein_coding Homo_sapiens 0 2261
ENST00000321805 UBE2D3-013 protein_coding Homo_sapiens 0 1103
ENST00000338145 UBE2D3-006 protein_coding Homo_sapiens 0 1075
ENST00000343106 UBE2D3-002 protein_coding Homo_sapiens 0 1155
ENST00000349311 UBE2D3-012 protein_coding Homo_sapiens 0 1050
ENST00000350435 UBE2D3-014 protein_coding Homo_sapiens 0 896
ENST00000357194 UBE2D3-003 protein_coding Homo_sapiens 0 736
ENST00000394801 UBE2D3-004 protein_coding Homo_sapiens 0 1908
ENST00000394803 UBE2D3-005 protein_coding Homo_sapiens 0 1977
ENST00000394804 UBE2D3-201 protein_coding Homo_sapiens 0 1908
ENST00000398733 UBE2D2-001 protein_coding Homo_sapiens 0 422
ENST00000398734 UBE2D2-004 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000420679 SPOPL-002 nonsense_mediated_decay Homo_sapiens 0 1029
ENST00000424409 UBE2D3P2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000430968 SPOPL-003 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000436669 UBE2D3P1-001 processed_pseudogene Homo_sapiens 0 630
ENST00000453744 UBE2D3-001 protein_coding Homo_sapiens 0 1908
ENST00000467775 SPOPL-004 retained_intron Homo_sapiens 0 315
ENST00000502404 UBE2D3-017 protein_coding Homo_sapiens 0 662
ENST00000502563 UBE2D3-027 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000502690 UBE2D3-011 protein_coding Homo_sapiens 0 527
ENST00000503282 UBE2D3-025 retained_intron Homo_sapiens 0 344
ENST00000503418 UBE2D3-021 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000503742 UBE2D3-007 retained_intron Homo_sapiens 0 763
ENST00000504211 UBE2D3-019 protein_coding Homo_sapiens 0 765
ENST00000504736 RP11-468N14.6-001 processed_pseudogene Homo_sapiens 0 586
ENST00000505007 UBE2D2-003 protein_coding Homo_sapiens 0 368
ENST00000505009 UBE2D3-031 retained_intron Homo_sapiens 0 575
ENST00000505207 UBE2D3-015 protein_coding Homo_sapiens 0 721
ENST00000505307 UBE2D3-022 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000505548 UBE2D2-002 protein_coding Homo_sapiens 0 422
ENST00000506559 RP13-644M16.1-001 processed_pseudogene Homo_sapiens 0 1194
ENST00000507845 UBE2D3-016 protein_coding Homo_sapiens 0 688
ENST00000508238 UBE2D3-009 protein_coding Homo_sapiens 0 584
ENST00000508249 UBE2D3-010 protein_coding Homo_sapiens 0 388
ENST00000508474 UBE2D3-008 retained_intron Homo_sapiens 0 1727
ENST00000508476 UBE2D3-018 protein_coding Homo_sapiens 0 442
ENST00000508635 UBE2D3-024 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000508818 UBE2D3-029 retained_intron Homo_sapiens 0 503
ENST00000508974 UBE2D3-026 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000509604 RP11-468N14.11-001 processed_pseudogene Homo_sapiens 0 883
ENST00000510129 UBE2D3-028 nonsense_mediated_decay Homo_sapiens 0 586
ENST00000510599 UBE2D3-030 retained_intron Homo_sapiens 0 287
ENST00000511691 UBE2D2-008 retained_intron Homo_sapiens 0 348
ENST00000511725 UBE2D2-006 protein_coding Homo_sapiens 0 418
ENST00000513098 UBE2D3-023 processed_transcript Homo_sapiens 0 346
ENST00000514755 UBE2D3-020 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000618836 UBE2D3-202 protein_coding Homo_sapiens 0 1729

Loading