Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000026828	Galnt5	10090	+	2:57997884-58045860	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000112616		Galnt5-001	57997884-58039878	protein_coding
	ENSMUST00000144671		Galnt5-002	57997884-58045860	processed_transcript
	ENSMUST00000166729		Galnt5-201	57997884-58045860	protein_coding

Expression Patterns

Transcript ID	Adipose	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000112616	0.174±0.13	0.151±0.02	0.062±0.00	0.101±0.06	2.840±0.53	0.024±0.02	0.018±0.00	0.012±0.00	0.271±0.07	0.074±0.02	0.142±0.07	0.050±0.01	N/A
ENSMUST00000166729	N/A	N/A	N/A	0.035±0.00	N/A	N/A	0.021±0.01	0.009±0.01	0.099±0.00	0.135±0.00	0.178±0.12	0.007±0.00	0.012±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000756	CIL_000756_0002	CGP	2:57237635-58045860
CIL_0008SE	CIL_0008SE_0002	VISTA	2:57493277-58094576
CIL_0008JI	CIL_0008JI_0002	VISTA	2:57520408-58121348
CIL_00088Y	CIL_00088Y_0002	VISTA	2:57578887-58179847
CIL_000757	CIL_000757_0002	CGP	2:57997884-58052864

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004653	IEA	polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794	IEA	Golgi apparatus
GO:0006486	IEA	protein glycosylation
GO:0016021	IEA	integral component of membrane
GO:0030246	IEA	carbohydrate binding
GO:0046872	IEA	metal ion binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000061709	CABZ01069344.1	Uncharacterized protein	protein_coding	Danio_rerio
ENSG00000136542	GALNT5	polypeptide N-acetylgalactosaminyltransferase 5	protein_coding	Homo_sapiens

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