C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008SE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs573 VISTA 9606 2:156704589-157305897
GeneTranscriptPositionBiotype
ENSG00000136542 (GALNT5)
polypeptide N-acetylgalactosaminyltransferase 5 		ENST00000259056 (GALNT5-001) 157257598-157314211 protein_coding
ENST00000461704 (GALNT5-003) 157301486-157302597 processed_transcript
ENST00000463418 (GALNT5-002) 157300803-157302597 processed_transcript
ENSG00000213194 (AC016732.2)
 ENST00000434574 (AC016732.2-001) 157210847-157211539 processed_pseudogene
ENSG00000222404 (RN7SKP281)
RNA, 7SK small nuclear pseudogene 281 		ENST00000410472 (RN7SKP281-201) 157298807-157299158 misc_RNA
ENSG00000238069 (RPLP0P7)
ribosomal protein, large, P0 pseudogene 7 		ENST00000416050 (RPLP0P7-001) 156777706-156778372 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008SE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs573 VISTA 10090 2:57493277-58094576
GeneTranscriptPositionBiotype
ENSMUSG00000026828 (Galnt5)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 		ENSMUST00000112616 (Galnt5-001) 57997884-58039878 protein_coding
ENSMUST00000144671 (Galnt5-002) 57997884-58045860 processed_transcript
ENSMUST00000166729 (Galnt5-201) 57997884-58045860 protein_coding
ENSMUSG00000026830 (Ermn)
ermin, ERM-like protein 		ENSMUST00000090940 (Ermn-001) 58045113-58052864 protein_coding
ENSMUSG00000081642 (Gm13532)
predicted gene 13532 		ENSMUST00000120373 (Gm13532-001) 57628989-57629228 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SE_0001ENSG00000136542ENST00000259056ENST00000461704ENST00000463418ENSG00000213194ENST00000434574ENSG00000222404ENST00000410472ENSG00000238069ENST00000416050CIL_0008SE_0002ENSMUSG00000026828ENSMUST00000112616ENSMUST00000144671ENSMUST00000166729ENSMUSG00000026830ENSMUST00000090940ENSMUSG00000081642ENSMUST00000120373
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SE_0001ENSG00000136542ENST00000259056ENST00000461704ENST00000463418ENSG00000213194ENST00000434574ENSG00000222404ENST00000410472ENSG00000238069ENST00000416050CIL_0008SE_0002ENSMUSG00000026828ENSMUST00000112616ENSMUST00000166729ENSMUSG00000026830ENSMUST00000090940ENSMUSG00000081642ENSMUST00000120373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136542 ENST00000259056 0.026±0.00 0.011±0.00 N/A 0.023±0.00 0.635±0.54 1.625±1.28 0.050±0.01 0.074±0.00 0.160±0.16 2.868±0.82 N/A 1.145±0.93 0.057±0.00 0.069±0.05
ENST00000461704 N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463418 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213194 ENST00000434574 0.062±0.00 0.015±0.00 N/A 0.031±0.00 N/A N/A 0.014±0.00 0.015±0.00 0.066±0.00 N/A N/A N/A N/A 0.247±0.21
ENSG00000222404 ENST00000410472 N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A 0.303±0.01
ENSG00000238069 ENST00000416050 N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026828 ENSMUST00000112616 0.174±0.13 N/A 0.151±0.02 0.062±0.00 0.101±0.06 2.840±0.53 0.024±0.02 0.018±0.00 0.012±0.00 0.271±0.07 0.074±0.02 0.142±0.07 0.050±0.01 N/A
ENSMUST00000144671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166729 N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.021±0.01 0.009±0.01 0.099±0.00 0.135±0.00 0.178±0.12 0.007±0.00 0.012±0.00
ENSMUSG00000026830 ENSMUST00000090940 0.012±0.00 0.131±0.07 N/A 2.723±3.42 0.042±0.03 N/A 0.019±0.00 0.021±0.01 0.029±0.03 N/A 0.008±0.00 0.104±0.02 0.040±0.00 0.046±0.04
ENSMUSG00000081642 ENSMUST00000120373 1.137±0.00 N/A 0.205±0.09 0.421±0.34 N/A N/A N/A N/A 1.034±0.47 N/A 0.323±0.00 0.228±0.00 0.511±0.22 N/A

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