C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112616 Galnt5-001 ENSMUSG00000026828 10090 + 2:57997884-58039878 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000112616
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000112616 0.174±0.13 0.151±0.02 0.062±0.00 0.101±0.06 2.840±0.53 0.024±0.02 0.018±0.00 0.012±0.00 0.271±0.07 0.074±0.02 0.142±0.07 0.050±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000756 CIL_000756_0002 CGP 2:57237635-58045860
CIL_0008SE CIL_0008SE_0002 VISTA 2:57493277-58094576
CIL_0008JI CIL_0008JI_0002 VISTA 2:57520408-58121348
CIL_00088Y CIL_00088Y_0002 VISTA 2:57578887-58179847
CIL_000757 CIL_000757_0002 CGP 2:57997884-58052864

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259056 GALNT5-001 protein_coding Homo_sapiens 0 2412

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