C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ET_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085265-ENSG00000130558 CGP 9606 9:134905890-135121179
GeneTranscriptPositionBiotype
ENSG00000085265 (FCN1)
ficolin (collagen/fibrinogen domain containing) 1 		ENST00000371806 (FCN1-001) 134909585-134917963 protein_coding
ENST00000616356 (FCN1-201) 134905890-134917877 protein_coding
ENSG00000130558 (OLFM1)
olfactomedin 1 		ENST00000252854 (OLFM1-001) 135075520-135121178 protein_coding
ENST00000277415 (OLFM1-002) 135075422-135098107 protein_coding
ENST00000339720 (OLFM1-010) 135086554-135098352 protein_coding
ENST00000371793 (OLFM1-004) 135087739-135120913 protein_coding
ENST00000371796 (OLFM1-003) 135087260-135121179 protein_coding
ENST00000371799 (OLFM1-006) 135075422-135077391 protein_coding
ENST00000371801 (OLFM1-007) 135075666-135076487 protein_coding
ENST00000392991 (OLFM1-009) 135087674-135098065 protein_coding
ENST00000483042 (OLFM1-005) 135105640-135120911 retained_intron
ENST00000539529 (OLFM1-011) 135087669-135098466 protein_coding
ENST00000539877 (OLFM1-013) 135095060-135119654 protein_coding
ENST00000545657 (OLFM1-012) 135095986-135119976 protein_coding
ENST00000615948 (OLFM1-201) 135075423-135077389 protein_coding
ENSG00000236403 (RP11-447M12.2)
 ENST00000417054 (RP11-447M12.2-001) 134937151-134943195 lincRNA
ENSG00000279935 (RP11-447M12.3)
 ENST00000625008 (RP11-447M12.3-001) 134992958-134995854 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0001ET_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026835-ENSMUSG00000026833 CGP 10090 2:28076378-28230736
GeneTranscriptPositionBiotype
ENSMUSG00000026833 (Olfm1)
olfactomedin 1 		ENSMUST00000028177 (Olfm1-001) 28205659-28230736 protein_coding
ENSMUST00000100244 (Olfm1-201) 28193093-28230736 protein_coding
ENSMUST00000102879 (Olfm1-003) 28205659-28214425 protein_coding
ENSMUST00000113920 (Olfm1-002) 28192992-28230462 protein_coding
ENSMUST00000152415 (Olfm1-004) 28192992-28214425 processed_transcript
ENSMUSG00000026835 (Fcnb)
ficolin B 		ENSMUST00000028179 (Fcnb-001) 28076378-28084885 protein_coding
ENSMUST00000117486 (Fcnb-002) 28078099-28084885 protein_coding
ENSMUST00000135472 (Fcnb-003) 28079739-28084885 protein_coding
ENSMUSG00000085693 (Gm13371)
predicted gene 13371 		ENSMUST00000137756 (Gm13371-001) 28092032-28093514 lincRNA
ENSMUSG00000086425 (F730016J06Rik)
RIKEN cDNA F730016J06 gene 		ENSMUST00000126140 (F730016J06Rik-001) 28095477-28127731 lincRNA
ENSMUST00000128888 (F730016J06Rik-003) 28118207-28125203 lincRNA
ENSMUST00000156508 (F730016J06Rik-002) 28095483-28113851 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ET_0001ENSG00000085265ENST00000371806ENST00000616356ENSG00000130558ENST00000252854ENST00000277415ENST00000339720ENST00000371793ENST00000371796ENST00000371799ENST00000371801ENST00000392991ENST00000483042ENST00000539529ENST00000539877ENST00000545657ENST00000615948ENSG00000236403ENST00000417054ENSG00000279935ENST00000625008CIL_0001ET_0002ENSMUSG00000026833ENSMUST00000028177ENSMUST00000100244ENSMUST00000102879ENSMUST00000113920ENSMUST00000152415ENSMUSG00000026835ENSMUST00000028179ENSMUST00000117486ENSMUST00000135472ENSMUSG00000085693ENSMUST00000137756ENSMUSG00000086425ENSMUST00000126140ENSMUST00000128888ENSMUST00000156508
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ET_0001ENSG00000085265ENST00000371806ENST00000616356ENSG00000130558ENST00000252854ENST00000277415ENST00000371793ENST00000371796ENST00000392991ENST00000483042ENST00000539529ENST00000539877ENSG00000236403ENST00000417054ENSG00000279935ENST00000625008CIL_0001ET_0002ENSMUSG00000026833ENSMUST00000028177ENSMUST00000100244ENSMUST00000102879ENSMUST00000113920ENSMUST00000152415ENSMUSG00000026835ENSMUST00000028179ENSMUST00000117486ENSMUST00000135472ENSMUSG00000085693ENSMUST00000137756ENSMUSG00000086425ENSMUST00000126140ENSMUST00000128888ENSMUST00000156508
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085265 ENST00000371806 14.899±0.00 8.387±0.00 N/A 0.227±0.00 2.444±1.41 0.808±0.08 2.676±0.00 0.981±0.68 1.199±0.94 16.906±14.29 0.098±0.00 1.458±1.17 18.566±12.43 1.055±0.85
ENST00000616356 N/A N/A 0.084±0.00 N/A N/A 0.049±0.00 0.005±0.00 N/A 0.129±0.00 0.589±0.11 0.006±0.00 0.036±0.00 0.936±0.60 0.055±0.00
ENSG00000130558 ENST00000252854 N/A N/A 0.339±0.00 86.084±0.00 0.332±0.00 2.450±1.88 1.212±1.15 N/A 0.573±0.00 2.240±0.00 1.779±0.00 0.373±0.06 N/A 0.702±0.00
ENST00000277415 5.543±0.00 10.184±0.00 N/A 51.853±0.00 4.411±0.00 13.705±0.00 0.654±0.52 0.053±0.00 N/A 4.550±0.00 N/A 16.267±0.00 N/A 7.667±0.00
ENST00000339720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371793 2.398±0.00 5.114±0.00 0.105±0.00 N/A 0.862±0.66 5.906±0.00 1.278±0.00 0.117±0.00 N/A 1.590±0.00 0.377±0.00 0.163±0.00 0.316±0.02 1.806±0.52
ENST00000371796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A
ENST00000371799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392991 N/A N/A N/A 63.852±35.34 N/A N/A N/A N/A 0.514±0.00 N/A 0.262±0.00 0.832±0.00 0.491±0.24 N/A
ENST00000483042 N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A
ENST00000539529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.155±0.00 1.741±0.00
ENST00000539877 N/A N/A 0.264±0.00 N/A 1.473±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236403 ENST00000417054 0.075±0.00 N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.03
ENSG00000279935 ENST00000625008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.422±1.72
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026833 ENSMUST00000028177 7.421±0.04 5.915±2.25 1.826±0.00 14.895±0.00 3.277±0.95 4.582±1.02 3.686±1.02 8.844±1.06 1.082±0.32 3.077±0.12 0.773±0.39 9.562±4.37 0.812±0.42 1.179±0.82
ENSMUST00000100244 9.776±4.03 13.275±1.85 7.010±2.05 95.632±82.57 6.913±1.79 3.286±1.86 N/A N/A 0.508±0.29 3.557±0.85 0.651±0.15 7.104±2.22 0.873±0.34 0.291±0.03
ENSMUST00000102879 N/A 12.314±5.02 5.848±0.79 265.963±0.00 5.356±0.44 2.550±0.00 N/A N/A N/A N/A 1.212±0.41 5.532±1.36 0.550±0.00 0.328±0.00
ENSMUST00000113920 23.379±7.36 N/A 5.159±0.11 51.552±14.18 10.705±2.40 3.422±1.56 2.869±0.56 4.484±0.71 0.569±0.25 7.745±0.78 0.681±0.00 5.731±1.53 0.639±0.41 0.162±0.06
ENSMUST00000152415 N/A 9.341±2.74 N/A N/A 4.398±0.00 N/A N/A N/A N/A N/A 0.733±0.00 N/A N/A 0.455±0.00
ENSMUSG00000026835 ENSMUST00000028179 0.028±0.00 N/A N/A 0.047±0.00 0.091±0.04 0.116±0.00 N/A N/A 20.037±10.34 0.066±0.00 N/A N/A 0.005±0.00 N/A
ENSMUST00000117486 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.060±0.00 N/A 0.067±0.00 0.008±0.00 N/A
ENSMUST00000135472 N/A N/A N/A 0.058±0.00 N/A 0.472±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A
ENSMUSG00000085693 ENSMUST00000137756 0.174±0.04 N/A N/A 0.054±0.03 0.305±0.00 N/A N/A 0.101±0.00 0.053±0.03 N/A N/A N/A N/A 0.189±0.00
ENSMUSG00000086425 ENSMUST00000126140 0.140±0.00 N/A 0.066±0.00 N/A 0.119±0.00 0.090±0.00 0.046±0.00 N/A 0.117±0.09 N/A N/A 0.114±0.05 0.034±0.01 N/A
ENSMUST00000128888 0.056±0.04 N/A 0.064±0.00 0.076±0.04 0.057±0.03 0.066±0.04 0.008±0.00 0.010±0.00 0.037±0.02 0.055±0.03 N/A 0.165±0.08 0.019±0.01 0.260±0.15
ENSMUST00000156508 0.075±0.05 0.024±0.00 N/A N/A 0.068±0.01 N/A N/A 0.011±0.00 0.041±0.01 0.029±0.01 N/A 0.062±0.03 N/A N/A

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