C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidase (mitochondrial processing) alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026926 Pmpca 10090 + 2:26389339-26397122 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076431 Pmpca-001 26389339-26397122 protein_coding
  ENSMUST00000114093 Pmpca-002 26389348-26393941 protein_coding
  ENSMUST00000134871 Pmpca-006 26389356-26391966 processed_transcript
  ENSMUST00000135155 Pmpca-003 26389354-26390295 processed_transcript
  ENSMUST00000137686 Pmpca-004 26389354-26390202 processed_transcript
  ENSMUST00000139535 Pmpca-005 26390927-26392398 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076431ENSMUST00000114093ENSMUST00000134871ENSMUST00000139535
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076431 20.233±0.73 32.508±7.76 18.550±3.17 24.716±8.51 18.266±2.57 18.366±2.57 22.790±6.93 16.993±4.61 20.164±8.41 14.973±1.27 27.960±8.54 27.007±5.69 32.409±8.18 25.559±8.80
ENSMUST00000114093 N/A N/A N/A 45.709±0.00 N/A N/A 18.247±0.00 N/A N/A N/A 17.590±0.00 56.847±0.00 72.358±49.22 34.827±0.00
ENSMUST00000134871 N/A 143.526±8.70 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.076±0.00 N/A 16.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122
CIL_00070Y CIL_00070Y_0003 CGP 2:26389339-26409203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005615 IEA extracellular space
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070566 pmpca peptidase (mitochondrial processing) alpha protein_coding Danio_rerio
ENSG00000165688 PMPCA peptidase (mitochondrial processing) alpha protein_coding Homo_sapiens

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