C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114093 Pmpca-002 ENSMUSG00000026926 10090 + 2:26389348-26393941 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleOvaryPlacentaTestisENSMUST00000114093
Transcript ID Brain Heart Muscle Ovary Placenta Testis
ENSMUST00000114093 45.709±0.00 18.247±0.00 17.590±0.00 56.847±0.00 72.358±49.22 34.827±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122
CIL_00070Y CIL_00070Y_0003 CGP 2:26389339-26409203

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371717 PMPCA-001 protein_coding Homo_sapiens 0 1382
ENST00000371720 PMPCA-004 retained_intron Homo_sapiens 0 497
ENST00000399219 PMPCA-007 protein_coding Homo_sapiens 0 776
ENST00000444897 PMPCA-003 protein_coding Homo_sapiens 0 470
ENST00000462616 PMPCA-002 retained_intron Homo_sapiens 0 647
ENST00000610649 PMPCA-008 processed_transcript Homo_sapiens 0 617
ENST00000612553 PMPCA-005 retained_intron Homo_sapiens 0 737
ENST00000614402 PMPCA-010 retained_intron Homo_sapiens 0 499
ENST00000619192 PMPCA-011 retained_intron Homo_sapiens 0 381
ENST00000620412 PMPCA-009 retained_intron Homo_sapiens 0 267
ENST00000620895 PMPCA-012 retained_intron Homo_sapiens 0 505
ENST00000622209 PMPCA-006 retained_intron Homo_sapiens 0 381

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