C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peptidase (mitochondrial processing) alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165688 PMPCA 9606 + 9:136410570-136423761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371717 PMPCA-001 136410570-136423761 protein_coding
  ENST00000371720 PMPCA-004 136410658-136416555 retained_intron
  ENST00000399219 PMPCA-007 136410661-136423760 protein_coding
  ENST00000444897 PMPCA-003 136417194-136423760 protein_coding
  ENST00000462616 PMPCA-002 136416067-136420933 retained_intron
  ENST00000610649 PMPCA-008 136411118-136416297 processed_transcript
  ENST00000612553 PMPCA-005 136410641-136416904 retained_intron
  ENST00000614402 PMPCA-010 136410674-136412965 retained_intron
  ENST00000619192 PMPCA-011 136410644-136412606 retained_intron
  ENST00000620412 PMPCA-009 136410658-136412504 retained_intron
  ENST00000620895 PMPCA-012 136412172-136417195 retained_intron
  ENST00000622209 PMPCA-006 136410660-136416845 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371717ENST00000399219
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371717 13.790±0.00 20.352±0.00 2.746±0.00 12.324±7.49 8.154±6.14 8.929±3.86 13.160±9.74 14.068±7.53 6.876±4.20 7.404±6.62 10.628±5.35 18.643±9.56 26.699±6.03 31.804±11.48
ENST00000399219 N/A N/A N/A N/A N/A N/A N/A N/A 12.888±0.00 N/A N/A N/A N/A 7.623±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0002 CGP 9:136375577-136410609
CIL_00034J CIL_00034J_0001 CGP 9:136401922-136423761
CIL_00070Y CIL_00070Y_0002 CGP 9:136410570-136439822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 TAS metalloendopeptidase activity
GO:0005615 IDA extracellular space
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006508 TAS proteolysis
GO:0006626 TAS protein targeting to mitochondrion
GO:0008152 IEA metabolic process
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070566 pmpca peptidase (mitochondrial processing) alpha protein_coding Danio_rerio
ENSMUSG00000026926 Pmpca peptidase (mitochondrial processing) alpha protein_coding Mus_musculus

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