C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00070Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070566-ENSDARG00000078655 CGP 7955 5:67549590-67591469
GeneTranscriptPositionBiotype
ENSDARG00000070566 (pmpca)
peptidase (mitochondrial processing) alpha 		ENSDART00000103730 (pmpca-001) 67549590-67572081 protein_coding
ENSDARG00000078655 (inpp5e)
inositol polyphosphate-5-phosphatase 		ENSDART00000114585 (inpp5e-201) 67575330-67590962 protein_coding
ENSDART00000143240 (inpp5e-001) 67576725-67591469 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00070Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165688-ENSG00000148384 CGP 9606 9:136410570-136439822
GeneTranscriptPositionBiotype
ENSG00000148384 (INPP5E)
inositol polyphosphate-5-phosphatase, 72 kDa 		ENST00000371712 (INPP5E-001) 136428619-136439822 protein_coding
ENSG00000165688 (PMPCA)
peptidase (mitochondrial processing) alpha 		ENST00000371717 (PMPCA-001) 136410570-136423761 protein_coding
ENST00000371720 (PMPCA-004) 136410658-136416555 retained_intron
ENST00000399219 (PMPCA-007) 136410661-136423760 protein_coding
ENST00000444897 (PMPCA-003) 136417194-136423760 protein_coding
ENST00000462616 (PMPCA-002) 136416067-136420933 retained_intron
ENST00000610649 (PMPCA-008) 136411118-136416297 processed_transcript
ENST00000612553 (PMPCA-005) 136410641-136416904 retained_intron
ENST00000614402 (PMPCA-010) 136410674-136412965 retained_intron
ENST00000619192 (PMPCA-011) 136410644-136412606 retained_intron
ENST00000620412 (PMPCA-009) 136410658-136412504 retained_intron
ENST00000620895 (PMPCA-012) 136412172-136417195 retained_intron
ENST00000622209 (PMPCA-006) 136410660-136416845 retained_intron
ENSG00000165689 (SDCCAG3)
serologically defined colon cancer antigen 3 		ENST00000298537 (SDCCAG3-001) 136401925-136410609 protein_coding
ENST00000357365 (SDCCAG3-002) 136401922-136410527 protein_coding
ENST00000371723 (SDCCAG3-004) 136407145-136410593 protein_coding
ENST00000371725 (SDCCAG3-003) 136401951-136410600 protein_coding
ENST00000417512 (SDCCAG3-007) 136402665-136407185 protein_coding
ENST00000446833 (SDCCAG3-006) 136407875-136410268 protein_coding
ENST00000461693 (SDCCAG3-011) 136402480-136405348 processed_transcript
ENST00000466579 (SDCCAG3-010) 136402682-136404780 processed_transcript
ENST00000468963 (SDCCAG3-009) 136407017-136407966 processed_transcript
ENST00000481114 (SDCCAG3-012) 136402644-136404108 processed_transcript
ENST00000486441 (SDCCAG3-008) 136404110-136407208 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00070Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026926-ENSMUSG00000026925 CGP 10090 2:26389339-26409203
GeneTranscriptPositionBiotype
ENSMUSG00000026926 (Pmpca)
peptidase (mitochondrial processing) alpha 		ENSMUST00000076431 (Pmpca-001) 26389339-26397122 protein_coding
ENSMUST00000114093 (Pmpca-002) 26389348-26393941 protein_coding
ENSMUST00000134871 (Pmpca-006) 26389356-26391966 processed_transcript
ENSMUST00000135155 (Pmpca-003) 26389354-26390295 processed_transcript
ENSMUST00000137686 (Pmpca-004) 26389354-26390202 processed_transcript
ENSMUST00000139535 (Pmpca-005) 26390927-26392398 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070Y_0001ENSDARG00000070566ENSDART00000103730ENSDARG00000078655ENSDART00000114585ENSDART00000143240CIL_00070Y_0002ENSG00000148384ENST00000371712ENSG00000165688ENST00000371717ENST00000371720ENST00000399219ENST00000444897ENST00000462616ENST00000610649ENST00000612553ENST00000614402ENST00000619192ENST00000620412ENST00000620895ENST00000622209ENSG00000165689ENST00000298537ENST00000357365ENST00000371723ENST00000371725ENST00000417512ENST00000446833ENST00000461693ENST00000466579ENST00000468963ENST00000481114ENST00000486441CIL_00070Y_0003ENSMUSG00000026926ENSMUST00000076431ENSMUST00000114093ENSMUST00000134871ENSMUST00000135155ENSMUST00000137686ENSMUST00000139535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070Y_0001ENSDARG00000070566ENSDART00000103730ENSDARG00000078655ENSDART00000114585ENSDART00000143240CIL_00070Y_0002ENSG00000148384ENST00000371712ENSG00000165688ENST00000371717ENST00000399219ENSG00000165689ENST00000298537ENST00000357365ENST00000371725CIL_00070Y_0003ENSMUSG00000026926ENSMUST00000076431ENSMUST00000114093ENSMUST00000134871ENSMUST00000139535
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070566 ENSDART00000103730 N/A N/A N/A 4.523±2.70 N/A N/A 31.409±20.46 18.706±9.95 1.609±0.00 N/A 6.725±0.00 N/A N/A N/A
ENSDARG00000078655 ENSDART00000114585 N/A N/A N/A 3.043±1.14 N/A N/A 1.083±0.41 0.578±0.14 0.113±0.00 N/A 0.628±0.00 N/A N/A N/A
ENSDART00000143240 N/A N/A N/A 1.861±0.56 N/A N/A 1.304±0.76 N/A 0.360±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148384 ENST00000371712 3.786±0.00 2.921±0.00 0.308±0.00 1.420±0.24 1.030±0.73 0.673±0.22 1.337±1.10 2.654±1.99 0.688±0.00 1.149±0.00 1.947±0.00 4.705±3.05 3.346±1.16 19.212±12.26
ENSG00000165688 ENST00000371717 13.790±0.00 20.352±0.00 2.746±0.00 12.324±7.49 8.154±6.14 8.929±3.86 13.160±9.74 14.068±7.53 6.876±4.20 7.404±6.62 10.628±5.35 18.643±9.56 26.699±6.03 31.804±11.48
ENST00000371720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399219 N/A N/A N/A N/A N/A N/A N/A N/A 12.888±0.00 N/A N/A N/A N/A 7.623±0.00
ENST00000444897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165689 ENST00000298537 N/A N/A N/A N/A 3.030±0.00 N/A N/A N/A 5.184±0.00 N/A N/A 1.978±0.00 N/A N/A
ENST00000357365 N/A N/A N/A N/A N/A N/A N/A 6.530±0.00 N/A N/A N/A N/A N/A N/A
ENST00000371723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371725 6.308±0.00 16.028±0.00 N/A N/A 4.076±2.66 7.410±0.00 4.613±0.00 5.391±0.00 10.267±0.00 6.757±0.00 3.504±1.99 15.938±11.65 9.218±4.02 26.695±18.27
ENST00000417512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026926 ENSMUST00000076431 20.233±0.73 32.508±7.76 18.550±3.17 24.716±8.51 18.266±2.57 18.366±2.57 22.790±6.93 16.993±4.61 20.164±8.41 14.973±1.27 27.960±8.54 27.007±5.69 32.409±8.18 25.559±8.80
ENSMUST00000114093 N/A N/A N/A 45.709±0.00 N/A N/A 18.247±0.00 N/A N/A N/A 17.590±0.00 56.847±0.00 72.358±49.22 34.827±0.00
ENSMUST00000134871 N/A 143.526±8.70 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.076±0.00 N/A 16.020±0.00

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