C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076431 Pmpca-001 ENSMUSG00000026926 10090 + 2:26389339-26397122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076431
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076431 20.233±0.73 32.508±7.76 18.550±3.17 24.716±8.51 18.266±2.57 18.366±2.57 22.790±6.93 16.993±4.61 20.164±8.41 14.973±1.27 27.960±8.54 27.007±5.69 32.409±8.18 25.559±8.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034J CIL_00034J_0002 CGP 2:26382802-26397122
CIL_00070Y CIL_00070Y_0003 CGP 2:26389339-26409203

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005615 IEA extracellular space
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371712 INPP5E-001 protein_coding Homo_sapiens 0.0000004 62
ENST00000371717 PMPCA-001 protein_coding Homo_sapiens 0 1670
ENST00000371720 PMPCA-004 retained_intron Homo_sapiens 0 497
ENST00000399219 PMPCA-007 protein_coding Homo_sapiens 0 1062
ENST00000444897 PMPCA-003 protein_coding Homo_sapiens 0 608
ENST00000462616 PMPCA-002 retained_intron Homo_sapiens 0 647
ENST00000508114 RP11-562F9.1-001 processed_pseudogene Homo_sapiens 0 1158
ENST00000610649 PMPCA-008 processed_transcript Homo_sapiens 0 617
ENST00000612553 PMPCA-005 retained_intron Homo_sapiens 0 737
ENST00000614402 PMPCA-010 retained_intron Homo_sapiens 0 499
ENST00000619192 PMPCA-011 retained_intron Homo_sapiens 0 381
ENST00000620412 PMPCA-009 retained_intron Homo_sapiens 0 267
ENST00000620895 PMPCA-012 retained_intron Homo_sapiens 0 505
ENST00000622209 PMPCA-006 retained_intron Homo_sapiens 0 381

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