C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier, Aralar), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027010 Slc25a12 10090 - 2:71271063-71367749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126493 Slc25a12-003 71329740-71344032 processed_transcript
  ENSMUST00000130715 Slc25a12-006 71279561-71282789 retained_intron
  ENSMUST00000137916 Slc25a12-004 71312468-71328840 processed_transcript
  ENSMUST00000146653 Slc25a12-007 71343890-71347828 processed_transcript
  ENSMUST00000147553 Slc25a12-005 71275077-71294645 processed_transcript
  ENSMUST00000151937 Slc25a12-001 71271063-71367749 protein_coding
  ENSMUST00000184169 Slc25a12-002 71274690-71367533 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147553ENSMUST00000151937ENSMUST00000184169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147553 N/A N/A N/A 39.391±0.00 4.310±0.00 N/A N/A N/A N/A N/A N/A 11.064±0.00 8.373±3.21 0.746±0.16
ENSMUST00000151937 1.321±0.92 4.518±0.77 2.578±0.60 4.072±1.01 2.645±1.48 2.011±0.40 6.557±1.80 5.001±0.84 1.019±0.23 2.334±0.45 20.316±1.46 2.431±0.68 0.893±0.15 0.119±0.05
ENSMUST00000184169 7.162±3.85 17.551±10.10 12.676±2.47 25.438±13.74 14.697±7.71 8.762±2.95 46.914±1.78 21.337±2.90 6.504±1.28 7.064±1.60 90.758±8.78 15.302±3.88 11.675±4.63 0.932±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_00062P CIL_00062P_0003 CGP 2:71211706-71367749
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K0 CIL_0004K0_0002 CGP 2:71271063-71441622

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 ISS L-glutamate transmembrane transporter activity
GO:0005509 ISS calcium ion binding
GO:0005739 ISS mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0015183 ISS L-aspartate transmembrane transporter activity
GO:0015810 ISS aspartate transport
GO:0015813 ISS L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0043490 ISS malate-aspartate shuttle
GO:0051592 ISS response to calcium ion
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029218 slc25a12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 protein_coding Danio_rerio
ENSG00000115840 SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12 protein_coding Homo_sapiens

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