C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier, Aralar), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184169 Slc25a12-002 ENSMUSG00000027010 10090 - 2:71274690-71367533 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000184169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000184169 7.162±3.85 17.551±10.10 12.676±2.47 25.438±13.74 14.697±7.71 8.762±2.95 46.914±1.78 21.337±2.90 6.504±1.28 7.064±1.60 90.758±8.78 15.302±3.88 11.675±4.63 0.932±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RB CIL_0007RB_0003 VISTA 2:71118479-71722071
CIL_0008A7 CIL_0008A7_0002 VISTA 2:71118555-71719483
CIL_00062P CIL_00062P_0003 CGP 2:71211706-71367749
CIL_0008C9 CIL_0008C9_0002 VISTA 2:71216484-71818219
CIL_0009AY CIL_0009AY_0002 VISTA 2:71227336-71828847
CIL_0008AZ CIL_0008AZ_0002 VISTA 2:71235378-71836557
CIL_0008B0 CIL_0008B0_0002 VISTA 2:71237156-71838581
CIL_0007JJ CIL_0007JJ_002C UCNEbase 2:71244754-71538420
CIL_0004K0 CIL_0004K0_0002 CGP 2:71271063-71441622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0043490 IMP malate-aspartate shuttle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263812 SLC25A12-006 nonsense_mediated_decay Homo_sapiens 0 2230
ENST00000422440 SLC25A12-001 protein_coding Homo_sapiens 0 1956
ENST00000426896 SLC25A12-007 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000464063 SLC25A12-010 processed_transcript Homo_sapiens 0 243
ENST00000472070 SLC25A12-002 retained_intron Homo_sapiens 0 518
ENST00000472748 SLC25A12-009 processed_transcript Homo_sapiens 0 241
ENST00000475360 SLC25A12-003 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000484227 SLC25A12-008 processed_transcript Homo_sapiens 0 241
ENST00000485880 SLC25A12-004 retained_intron Homo_sapiens 0 351

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