C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH-type containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027091 Zc3h15 10090 + 2:83644435-83664622 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081591 Zc3h15-001 83644435-83664622 protein_coding
  ENSMUST00000125422 Zc3h15-006 83644623-83660183 processed_transcript
  ENSMUST00000130948 Zc3h15-002 83644481-83658302 processed_transcript
  ENSMUST00000134789 Zc3h15-003 83660010-83664622 processed_transcript
  ENSMUST00000140086 Zc3h15-007 83657113-83661534 processed_transcript
  ENSMUST00000142756 Zc3h15-004 83644537-83653552 processed_transcript
  ENSMUST00000145099 Zc3h15-005 83656620-83658066 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081591ENSMUST00000125422ENSMUST00000130948ENSMUST00000134789ENSMUST00000140086ENSMUST00000142756
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081591 1.648±0.09 N/A 14.355±0.48 20.928±1.46 0.886±0.00 1.349±0.00 1.702±0.31 2.419±1.17 14.730±8.06 2.667±0.00 15.463±1.08 11.749±10.51 29.045±5.48 6.914±0.69
ENSMUST00000125422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.162±0.00 59.813±0.00 96.350±0.00
ENSMUST00000130948 5.604±0.00 8.653±2.02 N/A N/A 3.898±2.10 10.400±2.60 N/A 5.885±2.30 3.719±0.83 4.111±0.00 N/A 7.432±6.29 N/A N/A
ENSMUST00000134789 8.631±2.32 3.604±0.52 13.401±2.72 15.486±3.75 6.809±3.22 4.517±0.83 7.521±0.73 8.200±1.46 9.444±4.34 7.172±1.19 3.957±0.65 8.318±6.65 20.263±6.88 14.529±3.14
ENSMUST00000140086 N/A N/A N/A 63.870±0.00 N/A N/A N/A N/A N/A N/A N/A 84.954±0.00 115.798±40.72 57.112±0.00
ENSMUST00000142756 11.378±0.00 6.662±5.27 N/A 112.693±0.00 2.860±0.89 6.223±0.16 N/A 7.590±2.21 6.664±1.91 5.396±0.35 N/A N/A 327.674±23.42 12.403±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q4 CIL_0000Q4_0002 CGP 2:82943634-83664622
CIL_0002DB CIL_0002DB_0002 CGP 2:83644435-83806916

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0019221 IDA cytokine-mediated signaling pathway
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015889 zc3h15 zinc finger CCCH-type containing 15 protein_coding Danio_rerio
ENSG00000065548 ZC3H15 zinc finger CCCH-type containing 15 protein_coding Homo_sapiens

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