C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065548-ENSG00000138448 CGP 9606 2:186486156-186680901
GeneTranscriptPositionBiotype
ENSG00000065548 (ZC3H15)
zinc finger CCCH-type containing 15 		ENST00000337859 (ZC3H15-001) 186486156-186509363 protein_coding
ENST00000421536 (ZC3H15-002) 186486253-186506091 nonsense_mediated_decay
ENST00000437396 (ZC3H15-007) 186486263-186501375 nonsense_mediated_decay
ENST00000445547 (ZC3H15-009) 186506713-186509114 protein_coding
ENST00000468120 (ZC3H15-004) 186486918-186504099 processed_transcript
ENST00000477672 (ZC3H15-006) 186486267-186495319 processed_transcript
ENST00000481101 (ZC3H15-003) 186486891-186504086 processed_transcript
ENST00000496289 (ZC3H15-005) 186487270-186504070 processed_transcript
ENST00000498757 (ZC3H15-008) 186505091-186508690 retained_intron
ENSG00000138448 (ITGAV)
integrin, alpha V 		ENST00000261023 (ITGAV-001) 186590065-186680901 protein_coding
ENST00000374907 (ITGAV-003) 186590080-186680897 protein_coding
ENST00000430709 (ITGAV-008) 186668877-186676283 protein_coding
ENST00000433736 (ITGAV-004) 186600205-186677441 protein_coding
ENST00000460641 (ITGAV-006) 186665126-186668020 retained_intron
ENST00000474571 (ITGAV-011) 186668845-186669957 processed_transcript
ENST00000496477 (ITGAV-005) 186667648-186675638 retained_intron
ENST00000496854 (ITGAV-007) 186668524-186669914 retained_intron
ENSG00000224323 (DPRXP1)
divergent-paired related homeobox pseudogene 1 		ENST00000426312 (DPRXP1-001) 186488624-186489083 processed_pseudogene
CIL_0002DB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027091-ENSMUSG00000027087 CGP 10090 2:83644435-83806916
GeneTranscriptPositionBiotype
ENSMUSG00000027087 (Itgav)
integrin alpha V 		ENSMUST00000028499 (Itgav-001) 83724397-83806916 protein_coding
ENSMUST00000111740 (Itgav-005) 83724555-83806916 protein_coding
ENSMUST00000125360 (Itgav-002) 83724397-83756797 retained_intron
ENSMUST00000125402 (Itgav-008) 83801849-83803985 protein_coding
ENSMUST00000131192 (Itgav-009) 83802921-83806916 protein_coding
ENSMUST00000141725 (Itgav-006) 83724452-83747944 protein_coding
ENSMUST00000148256 (Itgav-004) 83724527-83725789 processed_transcript
ENSMUST00000151463 (Itgav-003) 83724466-83748372 retained_intron
ENSMUST00000155521 (Itgav-007) 83724457-83740738 processed_transcript
ENSMUSG00000027091 (Zc3h15)
zinc finger CCCH-type containing 15 		ENSMUST00000081591 (Zc3h15-001) 83644435-83664622 protein_coding
ENSMUST00000125422 (Zc3h15-006) 83644623-83660183 processed_transcript
ENSMUST00000130948 (Zc3h15-002) 83644481-83658302 processed_transcript
ENSMUST00000134789 (Zc3h15-003) 83660010-83664622 processed_transcript
ENSMUST00000140086 (Zc3h15-007) 83657113-83661534 processed_transcript
ENSMUST00000142756 (Zc3h15-004) 83644537-83653552 processed_transcript
ENSMUST00000145099 (Zc3h15-005) 83656620-83658066 processed_transcript
ENSMUSG00000081801 (Dnmt3l-ps1)
DNA methyltransferase 3-like, pseudogene 1 		ENSMUST00000118734 (Dnmt3l-ps1-001) 83744484-83745736 processed_pseudogene
ENSMUSG00000085450 (Gm13686)
predicted gene 13686 		ENSMUST00000122851 (Gm13686-001) 83700657-83701116 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DB_0001ENSG00000065548ENST00000337859ENST00000421536ENST00000437396ENST00000445547ENST00000468120ENST00000477672ENST00000481101ENST00000496289ENST00000498757ENSG00000138448ENST00000261023ENST00000374907ENST00000430709ENST00000433736ENST00000460641ENST00000474571ENST00000496477ENST00000496854ENSG00000224323ENST00000426312CIL_0002DB_0002ENSMUSG00000027087ENSMUST00000028499ENSMUST00000111740ENSMUST00000125360ENSMUST00000125402ENSMUST00000131192ENSMUST00000141725ENSMUST00000148256ENSMUST00000151463ENSMUST00000155521ENSMUSG00000027091ENSMUST00000081591ENSMUST00000125422ENSMUST00000130948ENSMUST00000134789ENSMUST00000140086ENSMUST00000142756ENSMUST00000145099ENSMUSG00000081801ENSMUST00000118734ENSMUSG00000085450ENSMUST00000122851
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DB_0001ENSG00000065548ENST00000337859ENST00000445547ENST00000498757ENSG00000138448ENST00000261023ENST00000374907ENST00000433736ENSG00000224323ENST00000426312CIL_0002DB_0002ENSMUSG00000027087ENSMUST00000028499ENSMUST00000111740ENSMUST00000125360ENSMUST00000141725ENSMUSG00000027091ENSMUST00000081591ENSMUST00000125422ENSMUST00000130948ENSMUST00000134789ENSMUST00000140086ENSMUST00000142756ENSMUSG00000081801ENSMUST00000118734ENSMUSG00000085450ENSMUST00000122851
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065548 ENST00000337859 13.886±0.00 19.400±0.00 2.359±0.00 18.094±6.42 12.545±3.28 16.574±9.79 6.237±4.32 14.754±7.62 9.800±4.42 11.098±3.49 8.100±6.21 29.039±15.55 17.143±8.87 28.175±4.34
ENST00000421536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445547 N/A N/A N/A 9.651±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.550±0.00
ENST00000468120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498757 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.487±0.00 N/A N/A N/A N/A
ENSG00000138448 ENST00000261023 10.748±0.00 6.575±0.00 1.446±0.00 16.452±4.50 11.645±1.89 8.988±2.14 25.175±10.13 12.577±11.33 7.374±4.76 10.263±0.46 4.792±0.00 13.273±5.17 12.129±6.65 4.771±2.49
ENST00000374907 N/A N/A 1.500±0.00 N/A 2.276±0.00 3.387±0.00 N/A 16.555±0.00 0.562±0.00 8.314±0.00 N/A 6.188±0.57 4.269±0.00 3.752±0.39
ENST00000430709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433736 N/A N/A 4.538±0.00 3.689±0.00 4.390±0.00 4.274±0.00 9.060±0.00 0.771±0.00 6.275±0.00 5.552±0.00 2.147±0.00 N/A N/A N/A
ENST00000460641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224323 ENST00000426312 N/A 0.141±0.00 0.604±0.00 N/A N/A 0.090±0.00 N/A N/A 0.199±0.00 N/A N/A N/A N/A 0.056±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027087 ENSMUST00000028499 6.543±3.04 5.017±0.90 12.992±0.09 2.370±0.29 5.011±0.70 4.209±0.40 2.259±0.98 12.630±0.77 2.116±0.55 6.842±0.76 1.264±0.53 11.746±2.59 12.825±5.32 0.618±0.28
ENSMUST00000111740 N/A N/A N/A 2.799±0.00 N/A N/A N/A N/A 0.641±0.25 N/A 0.947±0.47 6.883±0.00 7.990±1.27 0.334±0.02
ENSMUST00000125360 N/A 5.055±0.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.556±0.00 N/A N/A
ENSMUST00000125402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141725 N/A 34.160±7.09 N/A N/A 17.715±6.88 12.966±2.66 N/A 15.057±0.00 2.172±0.39 12.631±3.87 N/A 52.985±6.31 N/A N/A
ENSMUST00000148256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027091 ENSMUST00000081591 1.648±0.09 N/A 14.355±0.48 20.928±1.46 0.886±0.00 1.349±0.00 1.702±0.31 2.419±1.17 14.730±8.06 2.667±0.00 15.463±1.08 11.749±10.51 29.045±5.48 6.914±0.69
ENSMUST00000125422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.162±0.00 59.813±0.00 96.350±0.00
ENSMUST00000130948 5.604±0.00 8.653±2.02 N/A N/A 3.898±2.10 10.400±2.60 N/A 5.885±2.30 3.719±0.83 4.111±0.00 N/A 7.432±6.29 N/A N/A
ENSMUST00000134789 8.631±2.32 3.604±0.52 13.401±2.72 15.486±3.75 6.809±3.22 4.517±0.83 7.521±0.73 8.200±1.46 9.444±4.34 7.172±1.19 3.957±0.65 8.318±6.65 20.263±6.88 14.529±3.14
ENSMUST00000140086 N/A N/A N/A 63.870±0.00 N/A N/A N/A N/A N/A N/A N/A 84.954±0.00 115.798±40.72 57.112±0.00
ENSMUST00000142756 11.378±0.00 6.662±5.27 N/A 112.693±0.00 2.860±0.89 6.223±0.16 N/A 7.590±2.21 6.664±1.91 5.396±0.35 N/A N/A 327.674±23.42 12.403±0.64
ENSMUST00000145099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081801 ENSMUST00000118734 0.087±0.07 0.108±0.04 0.070±0.02 0.034±0.01 0.179±0.10 0.197±0.07 0.031±0.01 0.187±0.06 0.027±0.02 0.154±0.05 N/A 0.156±0.13 0.135±0.08 0.059±0.04
ENSMUSG00000085450 ENSMUST00000122851 N/A N/A N/A 0.243±0.00 N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A 0.282±0.00 3.058±1.17

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