C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Q4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188738-ENSG00000065548 CGP 9606 2:185738628-186509363
GeneTranscriptPositionBiotype
ENSG00000065548 (ZC3H15)
zinc finger CCCH-type containing 15 		ENST00000337859 (ZC3H15-001) 186486156-186509363 protein_coding
ENST00000421536 (ZC3H15-002) 186486253-186506091 nonsense_mediated_decay
ENST00000437396 (ZC3H15-007) 186486263-186501375 nonsense_mediated_decay
ENST00000445547 (ZC3H15-009) 186506713-186509114 protein_coding
ENST00000468120 (ZC3H15-004) 186486918-186504099 processed_transcript
ENST00000477672 (ZC3H15-006) 186486267-186495319 processed_transcript
ENST00000481101 (ZC3H15-003) 186486891-186504086 processed_transcript
ENST00000496289 (ZC3H15-005) 186487270-186504070 processed_transcript
ENST00000498757 (ZC3H15-008) 186505091-186508690 retained_intron
ENSG00000188738 (FSIP2)
fibrous sheath interacting protein 2 		ENST00000343098 (FSIP2-201) 185738628-185833289 protein_coding
ENST00000415915 (FSIP2-004) 185794618-185833289 nonsense_mediated_decay
ENST00000424728 (FSIP2-001) 185738895-185833290 protein_coding
ENST00000429412 (FSIP2-003) 185745540-185766549 nonsense_mediated_decay
ENST00000465275 (FSIP2-007) 185739286-185743294 processed_transcript
ENST00000469367 (FSIP2-008) 185743183-185745067 retained_intron
ENST00000611759 (FSIP2-202) 185806082-185833289 protein_coding
ENSG00000224019 (RPL21P32)
ribosomal protein L21 pseudogene 32 		ENST00000419877 (RPL21P32-001) 185956587-185957063 processed_pseudogene
ENSG00000224323 (DPRXP1)
divergent-paired related homeobox pseudogene 1 		ENST00000426312 (DPRXP1-001) 186488624-186489083 processed_pseudogene
ENSG00000226410 (AC104058.1)
 ENST00000448028 (AC104058.1-001) 186162949-186163245 processed_pseudogene
ENSG00000226747 (AC007966.1)
 ENST00000421998 (AC007966.1-001) 185719874-185738721 antisense
ENST00000427269 (AC007966.1-002) 185720212-185740479 antisense
ENST00000437717 (AC007966.1-003) 185736062-185739025 antisense
ENSG00000227692 (MED28P3)
mediator complex subunit 28 pseudogene 3 		ENST00000444288 (MED28P3-001) 186364598-186365128 processed_pseudogene
ENSG00000232568 (RPL23AP35)
ribosomal protein L23a pseudogene 35 		ENST00000451906 (RPL23AP35-001) 186261419-186261919 processed_pseudogene
ENSG00000237877 (LINC01473)
long intergenic non-protein coding RNA 1473 		ENST00000419719 (LINC01473-001) 186033531-186083223 lincRNA
ENST00000427108 (LINC01473-003) 186033495-186081345 lincRNA
ENST00000456653 (LINC01473-002) 186032891-186083233 lincRNA
ENSG00000259915 (RP11-410E4.1)
 ENST00000564407 (RP11-410E4.1-001) 186354570-186356773 lincRNA
CIL_0000Q4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075249-ENSMUSG00000027091 CGP 10090 2:82943634-83664622
GeneTranscriptPositionBiotype
ENSMUSG00000027091 (Zc3h15)
zinc finger CCCH-type containing 15 		ENSMUST00000081591 (Zc3h15-001) 83644435-83664622 protein_coding
ENSMUST00000125422 (Zc3h15-006) 83644623-83660183 processed_transcript
ENSMUST00000130948 (Zc3h15-002) 83644481-83658302 processed_transcript
ENSMUST00000134789 (Zc3h15-003) 83660010-83664622 processed_transcript
ENSMUST00000140086 (Zc3h15-007) 83657113-83661534 processed_transcript
ENSMUST00000142756 (Zc3h15-004) 83644537-83653552 processed_transcript
ENSMUST00000145099 (Zc3h15-005) 83656620-83658066 processed_transcript
ENSMUSG00000075249 (Fsip2)
fibrous sheath-interacting protein 2 		ENSMUST00000132967 (Fsip2-003) 82980796-83008937 nonsense_mediated_decay
ENSMUST00000136202 (Fsip2-002) 82949500-82965490 nonsense_mediated_decay
ENSMUST00000143764 (Fsip2-001) 82943634-83008937 protein_coding
ENSMUSG00000081400 (Gm13680)
predicted gene 13680 		ENSMUST00000119790 (Gm13680-001) 83353157-83353949 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Q4_0001ENSG00000065548ENST00000337859ENST00000421536ENST00000437396ENST00000445547ENST00000468120ENST00000477672ENST00000481101ENST00000496289ENST00000498757ENSG00000188738ENST00000343098ENST00000415915ENST00000424728ENST00000429412ENST00000465275ENST00000469367ENST00000611759ENSG00000224019ENST00000419877ENSG00000224323ENST00000426312ENSG00000226410ENST00000448028ENSG00000226747ENST00000421998ENST00000427269ENST00000437717ENSG00000227692ENST00000444288ENSG00000232568ENST00000451906ENSG00000237877ENST00000419719ENST00000427108ENST00000456653ENSG00000259915ENST00000564407CIL_0000Q4_0002ENSMUSG00000027091ENSMUST00000081591ENSMUST00000125422ENSMUST00000130948ENSMUST00000134789ENSMUST00000140086ENSMUST00000142756ENSMUST00000145099ENSMUSG00000075249ENSMUST00000132967ENSMUST00000136202ENSMUST00000143764ENSMUSG00000081400ENSMUST00000119790
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Q4_0001ENSG00000065548ENST00000337859ENST00000445547ENST00000498757ENSG00000188738ENST00000343098ENST00000415915ENST00000424728ENST00000429412ENST00000611759ENSG00000224019ENST00000419877ENSG00000224323ENST00000426312ENSG00000226410ENST00000448028ENSG00000226747ENST00000421998ENSG00000227692ENST00000444288ENSG00000232568ENST00000451906ENSG00000237877ENST00000419719ENST00000427108ENST00000456653ENSG00000259915ENST00000564407CIL_0000Q4_0002ENSMUSG00000027091ENSMUST00000081591ENSMUST00000125422ENSMUST00000130948ENSMUST00000134789ENSMUST00000140086ENSMUST00000142756ENSMUSG00000075249ENSMUST00000132967ENSMUST00000143764ENSMUSG00000081400ENSMUST00000119790
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065548 ENST00000337859 13.886±0.00 19.400±0.00 2.359±0.00 18.094±6.42 12.545±3.28 16.574±9.79 6.237±4.32 14.754±7.62 9.800±4.42 11.098±3.49 8.100±6.21 29.039±15.55 17.143±8.87 28.175±4.34
ENST00000421536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445547 N/A N/A N/A 9.651±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.550±0.00
ENST00000468120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498757 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.487±0.00 N/A N/A N/A N/A
ENSG00000188738 ENST00000343098 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.870±0.22
ENST00000415915 N/A N/A N/A N/A N/A 0.053±0.00 N/A 0.100±0.00 N/A N/A N/A N/A 0.028±0.00 N/A
ENST00000424728 N/A 0.018±0.00 0.346±0.00 0.102±0.08 0.185±0.17 0.026±0.00 0.059±0.04 0.050±0.01 0.350±0.00 0.129±0.12 0.010±0.00 0.132±0.15 0.016±0.00 1.185±0.66
ENST00000429412 0.143±0.00 0.308±0.00 1.088±0.00 0.504±0.24 0.931±0.78 0.862±0.71 0.652±0.44 0.678±0.46 0.916±0.85 0.797±0.77 0.267±0.19 0.717±0.60 0.207±0.16 N/A
ENST00000465275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611759 N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A 15.682±7.92
ENSG00000224019 ENST00000419877 N/A N/A 1.930±0.00 N/A 0.238±0.00 0.818±0.80 0.065±0.00 0.104±0.00 1.279±0.00 N/A N/A 0.166±0.18 0.038±0.00 0.097±0.03
ENSG00000224323 ENST00000426312 N/A 0.141±0.00 0.604±0.00 N/A N/A 0.090±0.00 N/A N/A 0.199±0.00 N/A N/A N/A N/A 0.056±0.00
ENSG00000226410 ENST00000448028 0.248±0.00 N/A N/A 0.554±0.50 N/A 0.294±0.00 0.308±0.21 N/A 0.976±0.00 0.360±0.00 N/A 0.926±0.00 N/A 0.080±0.00
ENSG00000226747 ENST00000421998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A
ENST00000427269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227692 ENST00000444288 0.024±0.00 0.025±0.00 N/A 0.148±0.00 0.208±0.00 N/A 0.086±0.04 0.120±0.00 0.086±0.00 N/A N/A 0.114±0.05 N/A 0.050±0.00
ENSG00000232568 ENST00000451906 0.057±0.00 0.061±0.00 1.018±0.00 N/A 0.063±0.03 1.649±0.00 0.047±0.00 0.030±0.00 0.718±0.00 1.385±0.00 0.051±0.00 0.047±0.00 N/A N/A
ENSG00000237877 ENST00000419719 N/A 0.209±0.00 N/A N/A 0.058±0.00 0.219±0.00 0.016±0.00 0.128±0.00 N/A 0.799±0.00 0.135±0.00 0.194±0.00 0.190±0.12 0.300±0.10
ENST00000427108 N/A N/A N/A N/A 0.086±0.00 N/A N/A 1.885±0.00 0.037±0.00 N/A N/A 0.130±0.10 0.074±0.00 0.300±0.00
ENST00000456653 0.095±0.00 N/A N/A N/A 0.014±0.00 N/A 0.291±0.00 N/A 0.014±0.00 0.284±0.23 0.218±0.00 0.066±0.04 0.040±0.00 0.089±0.00
ENSG00000259915 ENST00000564407 0.033±0.00 0.063±0.00 0.255±0.00 0.098±0.02 0.207±0.16 0.057±0.00 0.064±0.04 0.120±0.00 0.085±0.06 0.249±0.00 0.036±0.00 0.219±0.28 0.027±0.00 0.031±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027091 ENSMUST00000081591 1.648±0.09 N/A 14.355±0.48 20.928±1.46 0.886±0.00 1.349±0.00 1.702±0.31 2.419±1.17 14.730±8.06 2.667±0.00 15.463±1.08 11.749±10.51 29.045±5.48 6.914±0.69
ENSMUST00000125422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 42.162±0.00 59.813±0.00 96.350±0.00
ENSMUST00000130948 5.604±0.00 8.653±2.02 N/A N/A 3.898±2.10 10.400±2.60 N/A 5.885±2.30 3.719±0.83 4.111±0.00 N/A 7.432±6.29 N/A N/A
ENSMUST00000134789 8.631±2.32 3.604±0.52 13.401±2.72 15.486±3.75 6.809±3.22 4.517±0.83 7.521±0.73 8.200±1.46 9.444±4.34 7.172±1.19 3.957±0.65 8.318±6.65 20.263±6.88 14.529±3.14
ENSMUST00000140086 N/A N/A N/A 63.870±0.00 N/A N/A N/A N/A N/A N/A N/A 84.954±0.00 115.798±40.72 57.112±0.00
ENSMUST00000142756 11.378±0.00 6.662±5.27 N/A 112.693±0.00 2.860±0.89 6.223±0.16 N/A 7.590±2.21 6.664±1.91 5.396±0.35 N/A N/A 327.674±23.42 12.403±0.64
ENSMUST00000145099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075249 ENSMUST00000132967 0.018±0.00 N/A N/A 0.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A
ENSMUST00000136202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143764 N/A N/A 0.001±0.00 0.001±0.00 N/A N/A 0.004±0.00 0.002±0.00 0.002±0.00 N/A N/A 0.006±0.00 0.001±0.00 5.101±0.44
ENSMUSG00000081400 ENSMUST00000119790 20.963±11.94 1.807±1.42 1.358±0.52 0.956±0.58 16.776±6.33 10.025±3.65 7.677±1.56 9.008±2.03 3.456±2.04 15.253±3.83 0.522±0.35 9.242±5.55 0.155±0.09 0.620±0.26

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