C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactokinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094604 Galk2-001 ENSMUSG00000027207 10090 + 2:125866107-125983587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000094604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000094604 5.997±2.14 22.852±1.55 13.703±2.45 8.386±0.31 7.934±0.29 18.522±0.96 3.520±0.45 19.110±8.06 7.629±1.12 6.867±1.11 17.044±2.49 14.479±5.96 5.758±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PL CIL_0002PL_0002 CGP 2:125736986-125859139
CIL_0004QE CIL_0004QE_0003 CGP 2:125830304-125984299
CIL_0002E2 CIL_0002E2_0002 CGP 2:125859109-126152004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004335 IEA galactokinase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006012 IEA galactose metabolic process
GO:0033858 IEA N-acetylgalactosamine kinase activity
GO:0046835 IEA carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327171 GALK2-001 protein_coding Homo_sapiens 0 1522
ENST00000396509 GALK2-002 protein_coding Homo_sapiens 0 1524
ENST00000544523 GALK2-005 protein_coding Homo_sapiens 0 1522
ENST00000558399 GALK2-020 protein_coding Homo_sapiens 0 455
ENST00000559208 GALK2-013 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000559423 GALK2-017 nonsense_mediated_decay Homo_sapiens 0 544
ENST00000559454 GALK2-006 protein_coding Homo_sapiens 0 1520
ENST00000559573 FAM227B-003 protein_coding Homo_sapiens 0 294
ENST00000559580 GALK2-021 protein_coding Homo_sapiens 0 436
ENST00000559883 GALK2-007 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000560031 GALK2-003 protein_coding Homo_sapiens 0 1587
ENST00000560119 GALK2-004 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000560528 GALK2-019 protein_coding Homo_sapiens 0 283
ENST00000561014 GALK2-018 processed_transcript Homo_sapiens 0 702

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