C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027219 Slc28a2 10090 + 2:122426477-122461137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028652 Slc28a2-201 122439747-122461130 protein_coding
  ENSMUST00000110524 Slc28a2-002 122440763-122461133 protein_coding
  ENSMUST00000110525 Slc28a2-001 122426477-122461137 protein_coding
  ENSMUST00000139850 Slc28a2-003 122426494-122440969 processed_transcript
  ENSMUST00000153848 Slc28a2-004 122456399-122460551 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028652ENSMUST00000110524ENSMUST00000110525ENSMUST00000153848
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028652 N/A N/A N/A 0.011±0.00 N/A N/A N/A 0.087±0.00 0.039±0.02 N/A N/A 0.199±0.04 0.117±0.03 0.045±0.03
ENSMUST00000110524 3.059±1.08 0.706±0.52 0.775±0.11 0.011±0.00 7.725±0.74 0.706±0.17 3.626±1.19 0.438±0.17 0.342±0.32 0.798±0.51 2.892±0.53 0.350±0.33 1.075±0.64 0.074±0.04
ENSMUST00000110525 3.226±2.10 0.559±0.17 0.311±0.11 N/A 1.855±0.24 0.103±0.00 2.245±1.17 0.144±0.08 0.053±0.00 0.238±0.07 0.997±0.20 0.244±0.16 0.177±0.00 N/A
ENSMUST00000153848 N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A 0.238±0.00 N/A N/A 0.526±0.19 N/A 0.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NE CIL_0004NE_0002 CGP 2:122348892-122461137

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0005887 ISS integral component of plasma membrane
GO:0015211 IDA purine nucleoside transmembrane transporter activity
GO:0015860 TAS purine nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060879 SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2 protein_coding Danio_rerio
ENSG00000137860 SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2 protein_coding Homo_sapiens

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