C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110525 Slc28a2-001 ENSMUSG00000027219 10090 + 2:122426477-122461137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110525
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110525 3.226±2.10 0.559±0.17 0.311±0.11 1.855±0.24 0.103±0.00 2.245±1.17 0.144±0.08 0.053±0.00 0.238±0.07 0.997±0.20 0.244±0.16 0.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NE CIL_0004NE_0002 CGP 2:122348892-122461137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0005887 ISS integral component of plasma membrane
GO:0015211 IDA purine nucleoside transmembrane transporter activity
GO:0015860 TAS purine nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347644 SLC28A2-001 protein_coding Homo_sapiens 0 1847
ENST00000559924 SLC28A2-004 nonsense_mediated_decay Homo_sapiens 8e-28 128
ENST00000560438 SLC28A2-003 protein_coding Homo_sapiens 0 359

Loading