C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 28 (sodium-coupled nucleoside transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110524 Slc28a2-002 ENSMUSG00000027219 10090 + 2:122440763-122461133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110524
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110524 3.059±1.08 0.706±0.52 0.775±0.11 0.011±0.00 7.725±0.74 0.706±0.17 3.626±1.19 0.438±0.17 0.342±0.32 0.798±0.51 2.892±0.53 0.350±0.33 1.075±0.64 0.074±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NE CIL_0004NE_0002 CGP 2:122348892-122461137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001882 IEA nucleoside binding
GO:0005415 IEA nucleoside:sodium symporter activity
GO:0005887 ISS integral component of plasma membrane
GO:0015211 IDA purine nucleoside transmembrane transporter activity
GO:0015860 TAS purine nucleoside transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347644 SLC28A2-001 protein_coding Homo_sapiens 0 1847
ENST00000559924 SLC28A2-004 nonsense_mediated_decay Homo_sapiens 8e-28 128
ENST00000560438 SLC28A2-003 protein_coding Homo_sapiens 0 359

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