C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 3, subunit J1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027236 Eif3j1 10090 + 2:122028546-122056598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028668 Eif3j1-001 122028546-122056598 protein_coding
  ENSMUST00000142747 Eif3j1-002 122028652-122029328 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028668
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028668 1.865±0.04 6.995±2.20 3.549±1.35 3.224±2.49 2.454±1.07 2.720±0.11 2.140±0.39 1.429±0.52 6.552±5.80 2.419±0.58 13.245±2.29 5.164±1.35 9.312±3.45 3.020±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0002 CGP 2:121956001-122056598
CIL_0004DI CIL_0004DI_0002 CGP 2:122028546-122118386

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005852 IEA eukaryotic translation initiation factor 3 complex
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012603 eif3ja eukaryotic translation initiation factor 3, subunit Ja protein_coding Danio_rerio
ENSDARG00000053370 eif3jb eukaryotic translation initiation factor 3, subunit Jb protein_coding Danio_rerio
ENSDARG00000097988 EIF3J (3 of 3) eukaryotic translation initiation factor 3, subunit J protein_coding Danio_rerio
ENSG00000104131 EIF3J eukaryotic translation initiation factor 3, subunit J protein_coding Homo_sapiens

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