C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0004DI_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000104131-ENSG00000104133 | CGP | 9606 | 15:44537057-44663678  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000104131  (EIF3J)eukaryotic translation initiation factor 3, subunit J |
ENST00000261868 (EIF3J-001)
|
44537057-44562803 | protein_coding | |
|
ENST00000424492 (EIF3J-003)
|
44537125-44561999 | protein_coding | ||
|
ENST00000535391 (EIF3J-002)
|
44537183-44561447 | protein_coding | ||
|
ENST00000536248 (EIF3J-004)
|
44554624-44560575 | protein_coding | ||
|
ENST00000558053 (EIF3J-006)
|
44551438-44557751 | retained_intron | ||
|
ENST00000558227 (EIF3J-005)
|
44550683-44554574 | retained_intron | ||
|
ENST00000558353 (EIF3J-007)
|
44557505-44563029 | nonsense_mediated_decay | ||
|
ENSG00000104133 (SPG11) spastic paraplegia 11 (autosomal recessive) |
ENST00000261866 (SPG11-001)
|
44562696-44663664 | protein_coding | |
|
ENST00000427534 (SPG11-004)
|
44563121-44663647 | protein_coding | ||
|
ENST00000535302 (SPG11-002)
|
44562854-44663675 | protein_coding | ||
|
ENST00000557866 (SPG11-021)
|
44633470-44651644 | non_stop_decay | ||
|
ENST00000558080 (SPG11-026)
|
44573358-44575272 | retained_intron | ||
|
ENST00000558093 (SPG11-011)
|
44598354-44606158 | retained_intron | ||
|
ENST00000558138 (SPG11-019)
|
44564639-44572824 | protein_coding | ||
|
ENST00000558155 (SPG11-013)
|
44585838-44596346 | nonsense_mediated_decay | ||
|
ENST00000558253 (SPG11-014)
|
44585652-44590937 | processed_transcript | ||
|
ENST00000558319 (SPG11-006)
|
44573357-44663678 | protein_coding | ||
|
ENST00000558561 (SPG11-024)
|
44596804-44598679 | retained_intron | ||
|
ENST00000558790 (SPG11-015)
|
44584259-44590528 | processed_transcript | ||
|
ENST00000558988 (SPG11-023)
|
44600260-44610857 | protein_coding | ||
|
ENST00000558989 (SPG11-008)
|
44615428-44621866 | retained_intron | ||
|
ENST00000559193 (SPG11-003)
|
44622476-44663658 | protein_coding | ||
|
ENST00000559347 (SPG11-027)
|
44565966-44572640 | processed_transcript | ||
|
ENST00000559511 (SPG11-007)
|
44562697-44584527 | protein_coding | ||
|
ENST00000559754 (SPG11-010)
|
44600564-44610859 | protein_coding | ||
|
ENST00000559822 (SPG11-016)
|
44573734-44584451 | nonsense_mediated_decay | ||
|
ENST00000559933 (SPG11-017)
|
44570553-44573820 | retained_intron | ||
|
ENST00000560299 (SPG11-020)
|
44564553-44566144 | retained_intron | ||
|
ENST00000560435 (SPG11-022)
|
44613509-44620305 | nonsense_mediated_decay | ||
|
ENST00000560858 (SPG11-025)
|
44585762-44595273 | nonsense_mediated_decay | ||
|
ENST00000561268 (SPG11-018)
|
44567338-44573683 | retained_intron | ||
|
ENST00000561391 (SPG11-012)
|
44596116-44597172 | retained_intron | ||
|
ENSG00000259659 (RP11-151N17.1) |
ENST00000558006 (RP11-151N17.1-001)
|
44557829-44559188 | sense_intronic | |
| CIL_0004DI_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000027236-ENSMUSG00000033396 | CGP | 10090 | 2:122028546-122118386 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027236 (Eif3j1) eukaryotic translation initiation factor 3, subunit J1 |
ENSMUST00000028668 (Eif3j1-001)
|
122028546-122056598 | protein_coding | |
|
ENSMUST00000142747 (Eif3j1-002)
|
122028652-122029328 | processed_transcript | ||
|
ENSMUSG00000033396 (Spg11) spastic paraplegia 11 |
ENSMUST00000036450 (Spg11-001)
|
122053520-122118386 | protein_coding | |
|
ENSMUST00000133145 (Spg11-002)
|
122093540-122118296 | processed_transcript | ||
|
ENSMUST00000135847 (Spg11-003)
|
122107666-122118375 | processed_transcript | ||
Expression Patterns
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