C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin 1, sialoadhesin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027322 Siglec1 10090 - 2:131069220-131086765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028794 Siglec1-001 131069220-131086765 protein_coding
  ENSMUST00000110226 Siglec1-003 131083573-131086765 protein_coding
  ENSMUST00000110227 Siglec1-002 131072054-131086765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028794ENSMUST00000110227
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028794 2.783±0.78 6.848±1.51 N/A 0.034±0.00 18.763±7.07 1.490±0.44 0.652±0.25 0.607±0.42 1.916±1.44 5.383±1.88 0.084±0.03 6.507±2.19 0.089±0.07 0.088±0.04
ENSMUST00000110227 1.279±0.14 0.940±0.01 0.678±0.00 0.187±0.04 3.020±0.00 0.412±0.11 0.260±0.14 0.214±0.11 0.740±0.13 1.203±0.17 0.102±0.02 1.489±0.34 0.331±0.20 0.150±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D8 CIL_0003D8_0002 CGP 2:131050591-131086765
CIL_0004Q3 CIL_0004Q3_0002 CGP 2:131069220-131146321

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0070234 IMP positive regulation of T cell apoptotic process
GO:2001238 IMP positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000088827 SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin protein_coding Homo_sapiens

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