C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin 1, sialoadhesin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028794 Siglec1-001 ENSMUSG00000027322 10090 - 2:131069220-131086765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028794
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028794 2.783±0.78 6.848±1.51 0.034±0.00 18.763±7.07 1.490±0.44 0.652±0.25 0.607±0.42 1.916±1.44 5.383±1.88 0.084±0.03 6.507±2.19 0.089±0.07 0.088±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D8 CIL_0003D8_0002 CGP 2:131050591-131086765
CIL_0004Q3 CIL_0004Q3_0002 CGP 2:131069220-131146321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006897 IEA endocytosis
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0070234 IMP positive regulation of T cell apoptotic process
GO:2001238 IMP positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344754 SIGLEC1-001 protein_coding Homo_sapiens 0 3155

Loading