C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin 1, sialoadhesin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110227 Siglec1-002 ENSMUSG00000027322 10090 - 2:131072054-131086765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110227
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110227 1.279±0.14 0.940±0.01 0.678±0.00 0.187±0.04 3.020±0.00 0.412±0.11 0.260±0.14 0.214±0.11 0.740±0.13 1.203±0.17 0.102±0.02 1.489±0.34 0.331±0.20 0.150±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D8 CIL_0003D8_0002 CGP 2:131050591-131086765
CIL_0004Q3 CIL_0004Q3_0002 CGP 2:131069220-131146321

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0070234 IMP positive regulation of T cell apoptotic process
GO:2001238 IMP positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344754 SIGLEC1-001 protein_coding Homo_sapiens 0 2894

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