C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Q3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088827-ENSG00000132622 CGP 9606 20:3686970-3753111
GeneTranscriptPositionBiotype
ENSG00000088827 (SIGLEC1)
sialic acid binding Ig-like lectin 1, sialoadhesin 		ENST00000344754 (SIGLEC1-001) 3686970-3707128 protein_coding
ENST00000419548 (SIGLEC1-002) 3686970-3693079 protein_coding
ENSG00000132622 (HSPA12B)
heat shock 70kD protein 12B 		ENST00000254963 (HSPA12B-001) 3732667-3753111 protein_coding
ENST00000399701 (HSPA12B-002) 3732711-3753111 protein_coding
CIL_0004Q3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027322-ENSMUSG00000074793 CGP 10090 2:131069220-131146321
GeneTranscriptPositionBiotype
ENSMUSG00000027322 (Siglec1)
sialic acid binding Ig-like lectin 1, sialoadhesin 		ENSMUST00000028794 (Siglec1-001) 131069220-131086765 protein_coding
ENSMUST00000110226 (Siglec1-003) 131083573-131086765 protein_coding
ENSMUST00000110227 (Siglec1-002) 131072054-131086765 protein_coding
ENSMUSG00000074793 (Hspa12b)
heat shock protein 12B 		ENSMUST00000099349 (Hspa12b-001) 131127280-131146321 protein_coding
ENSMUST00000100763 (Hspa12b-003) 131127442-131137336 protein_coding
ENSMUST00000127862 (Hspa12b-002) 131127494-131145227 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Q3_0001ENSG00000088827ENST00000344754ENST00000419548ENSG00000132622ENST00000254963ENST00000399701CIL_0004Q3_0002ENSMUSG00000027322ENSMUST00000028794ENSMUST00000110226ENSMUST00000110227ENSMUSG00000074793ENSMUST00000099349ENSMUST00000100763ENSMUST00000127862
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Q3_0001ENSG00000088827ENST00000344754ENST00000419548ENSG00000132622ENST00000254963ENST00000399701CIL_0004Q3_0002ENSMUSG00000027322ENSMUST00000028794ENSMUST00000110227ENSMUSG00000074793ENSMUST00000099349ENSMUST00000127862
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088827 ENST00000344754 0.994±0.00 2.407±0.00 0.128±0.00 0.182±0.00 1.726±0.00 0.172±0.00 1.170±0.88 0.413±0.17 1.066±0.60 1.675±0.75 1.016±0.00 0.644±0.45 7.596±0.29 0.616±0.17
ENST00000419548 N/A N/A N/A 0.080±0.06 1.093±0.00 0.830±0.00 0.637±0.53 0.530±0.00 0.872±0.49 0.465±0.00 0.971±0.00 0.592±0.40 3.623±1.65 1.121±0.48
ENSG00000132622 ENST00000254963 37.175±0.00 14.682±0.00 0.315±0.00 1.134±0.00 21.046±0.00 7.997±0.00 7.958±0.00 6.459±0.00 0.961±0.06 3.841±2.04 0.884±0.00 10.200±2.40 12.253±4.17 9.143±1.01
ENST00000399701 N/A N/A N/A 0.244±0.00 0.337±0.00 N/A N/A 0.141±0.00 0.135±0.00 N/A 0.596±0.13 2.109±1.23 9.754±0.00 1.264±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027322 ENSMUST00000028794 2.783±0.78 6.848±1.51 N/A 0.034±0.00 18.763±7.07 1.490±0.44 0.652±0.25 0.607±0.42 1.916±1.44 5.383±1.88 0.084±0.03 6.507±2.19 0.089±0.07 0.088±0.04
ENSMUST00000110226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110227 1.279±0.14 0.940±0.01 0.678±0.00 0.187±0.04 3.020±0.00 0.412±0.11 0.260±0.14 0.214±0.11 0.740±0.13 1.203±0.17 0.102±0.02 1.489±0.34 0.331±0.20 0.150±0.04
ENSMUSG00000074793 ENSMUST00000099349 22.806±8.63 5.509±1.34 13.624±0.97 2.604±0.18 11.461±3.42 2.817±0.32 9.222±1.18 3.412±0.31 1.154±0.80 24.276±5.48 3.263±0.79 7.350±1.79 4.595±2.22 2.214±0.43
ENSMUST00000100763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127862 10.607±2.23 N/A 4.574±0.85 1.013±0.25 2.559±0.00 1.053±0.27 2.452±0.49 1.016±0.30 0.435±0.28 6.311±1.11 N/A 3.189±1.25 1.909±0.73 1.344±0.43

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