C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 230
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027341 Tmem230 10090 - 2:132239492-132247807 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028816 Tmem230-001 132239492-132247807 protein_coding
  ENSMUST00000110163 Tmem230-003 132239492-132247769 protein_coding
  ENSMUST00000110164 Tmem230-005 132239492-132247654 protein_coding
  ENSMUST00000141813 Tmem230-004 132245852-132247756 retained_intron
  ENSMUST00000143782 Tmem230-002 132245320-132247759 processed_transcript
  ENSMUST00000180286 Tmem230-201 132239494-132247788 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028816ENSMUST00000110163ENSMUST00000110164ENSMUST00000143782ENSMUST00000180286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028816 16.645±3.17 20.789±3.80 14.792±1.36 8.387±5.71 15.945±4.35 14.246±5.43 10.437±1.62 13.499±0.99 9.406±1.48 14.269±1.11 11.238±0.70 21.289±9.72 7.386±5.52 22.048±10.79
ENSMUST00000110163 4.428±1.08 8.549±1.41 2.870±0.00 1.170±0.70 5.547±0.23 4.663±0.64 2.243±0.40 3.691±0.65 3.618±0.91 3.792±0.33 2.355±0.35 6.580±3.80 2.510±0.70 N/A
ENSMUST00000110164 2.225±0.00 N/A 1.328±0.13 1.098±0.58 1.406±0.16 N/A N/A N/A 1.523±0.30 2.058±0.00 N/A 1.079±0.29 0.627±0.17 0.184±0.00
ENSMUST00000143782 N/A 47.995±21.05 N/A N/A 30.741±3.51 25.809±9.11 N/A 17.804±2.44 9.324±1.35 23.515±4.47 N/A 73.323±12.76 N/A 63.867±6.33
ENSMUST00000180286 N/A N/A N/A N/A 3.760±0.00 N/A N/A N/A N/A N/A N/A 4.323±3.12 2.021±0.34 0.695±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LV CIL_0003LV_0002 CGP 2:132052496-132247807
CIL_0003M9 CIL_0003M9_0002 CGP 2:132239492-132253314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027687 transmembrane protein 230 protein_coding Danio_rerio
ENSDARG00000069674 TMEM230 transmembrane protein 230 protein_coding Danio_rerio
ENSG00000089063 TMEM230 transmembrane protein 230 protein_coding Homo_sapiens

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