C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 230
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028816 Tmem230-001 ENSMUSG00000027341 10090 - 2:132239492-132247807 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028816 16.645±3.17 20.789±3.80 14.792±1.36 8.387±5.71 15.945±4.35 14.246±5.43 10.437±1.62 13.499±0.99 9.406±1.48 14.269±1.11 11.238±0.70 21.289±9.72 7.386±5.52 22.048±10.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LV CIL_0003LV_0002 CGP 2:132052496-132247807
CIL_0003M9 CIL_0003M9_0002 CGP 2:132239492-132253314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000202834 TMEM230-006 protein_coding Homo_sapiens 0 538
ENST00000342308 TMEM230-003 protein_coding Homo_sapiens 0 538
ENST00000379276 TMEM230-004 protein_coding Homo_sapiens 0 329
ENST00000379277 TMEM230-010 protein_coding Homo_sapiens 0 549
ENST00000379279 TMEM230-008 protein_coding Homo_sapiens 0 538
ENST00000379283 TMEM230-001 protein_coding Homo_sapiens 0 540
ENST00000379286 TMEM230-007 protein_coding Homo_sapiens 0 538
ENST00000379299 TMEM230-005 protein_coding Homo_sapiens 0 538
ENST00000451535 RP6-191P20.3-001 processed_pseudogene Homo_sapiens 0 255
ENST00000492419 TMEM230-009 processed_transcript Homo_sapiens 0 388
ENST00000530434 RP11-59K5.1-001 processed_pseudogene Homo_sapiens 0 316
ENST00000612323 TMEM230-011 protein_coding Homo_sapiens 0 318
ENST00000615008 TMEM230-012 protein_coding Homo_sapiens 0 320

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