C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fermitin family homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038280 Fermt1-001 ENSMUSG00000027356 10090 - 2:132904389-132945906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038280
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038280 2.572±2.56 1.546±0.28 0.098±0.04 1.130±0.05 15.308±2.96 0.009±0.00 6.247±0.99 0.090±0.11 0.337±0.09 0.015±0.01 1.929±0.56 0.215±0.11 0.047±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IC CIL_0001IC_0002 CGP 2:132868305-132945906
CIL_0001J1 CIL_0001J1_0002 CGP 2:132904389-133562885

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 ISS cell adhesion
GO:0030054 ISS cell junction
GO:0031941 IDA filamentous actin
GO:0042995 IEA cell projection
GO:0043616 ISS keratinocyte proliferation
GO:0051546 ISS keratinocyte migration
GO:0090162 ISS establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217289 FERMT1-001 protein_coding Homo_sapiens 0 2143
ENST00000478194 FERMT1-002 processed_transcript Homo_sapiens 0 1055
ENST00000536936 FERMT1-201 protein_coding Homo_sapiens 0 1432

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