C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061491 Slc27a2-001 ENSMUSG00000027359 10090 + 2:126552407-126588243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000061491
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000061491 0.368±0.08 1.873±0.15 1.881±0.82 0.749±0.32 0.232±0.09 384.973±211.66 122.210±140.60 0.534±0.24 0.672±0.34 14.410±15.21 0.453±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243
CIL_0002E7 CIL_0002E7_0002 CGP 2:126552407-126619299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0001561 IEA fatty acid alpha-oxidation
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005102 IEA receptor binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005777 IDA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0005779 ISS integral component of peroxisomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005788 ISS endoplasmic reticulum lumen
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006635 IEA fatty acid beta-oxidation
GO:0006699 IEA bile acid biosynthetic process
GO:0015245 IDA fatty acid transporter activity
GO:0015908 IDA fatty acid transport
GO:0019899 IEA enzyme binding
GO:0030176 IEA integral component of endoplasmic reticulum membrane
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0042760 IMP very long-chain fatty acid catabolic process
GO:0044539 IEA long-chain fatty acid import
GO:0050197 IEA phytanate-CoA ligase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0070251 IEA pristanate-CoA ligase activity
GO:0097089 IEA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267842 SLC27A2-001 protein_coding Homo_sapiens 0 1773
ENST00000380902 SLC27A2-002 protein_coding Homo_sapiens 0 1081
ENST00000544960 SLC27A2-003 protein_coding Homo_sapiens 0 1179
ENST00000559938 SLC27A2-004 retained_intron Homo_sapiens 0 254

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