C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141482 Slc27a2-003 ENSMUSG00000027359 10090 + 2:126556128-126587938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000141482
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000141482 0.483±0.02 0.013±0.00 4.607±0.00 4.432±0.00 0.255±0.09 311.991±52.22 40.001±32.75 0.064±0.01 1.060±0.48 3.815±4.59 0.583±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243
CIL_0002E7 CIL_0002E7_0002 CGP 2:126552407-126619299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 IDA very long-chain fatty acid metabolic process
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005739 IDA mitochondrion
GO:0005777 IDA peroxisome
GO:0005783 IDA endoplasmic reticulum
GO:0015245 IDA fatty acid transporter activity
GO:0015908 IDA fatty acid transport
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity
GO:0042760 IMP very long-chain fatty acid catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267842 SLC27A2-001 protein_coding Homo_sapiens 0 1230
ENST00000380902 SLC27A2-002 protein_coding Homo_sapiens 0 974
ENST00000544960 SLC27A2-003 protein_coding Homo_sapiens 0 1070
ENST00000559938 SLC27A2-004 retained_intron Homo_sapiens 0 254

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