C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103224 Trpm7-001 ENSMUSG00000027365 10090 - 2:126791565-126876230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103224 5.293±1.44 2.870±0.86 6.307±0.37 5.884±3.01 3.164±0.34 2.370±1.02 3.660±0.69 6.042±1.12 3.899±1.78 4.940±0.58 3.303±0.61 3.439±2.09 6.032±2.16 1.882±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DY CIL_0002DY_0002 CGP 2:126709096-126876230
CIL_0002DX CIL_0002DX_0002 CGP 2:126791565-126933235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0003779 IDA actin binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005262 IDA calcium channel activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005886 IDA plasma membrane
GO:0006468 IDA protein phosphorylation
GO:0006816 IDA calcium ion transport
GO:0010961 IEA cellular magnesium ion homeostasis
GO:0016021 IEA integral component of membrane
GO:0016301 IDA kinase activity
GO:0016340 IDA calcium-dependent cell-matrix adhesion
GO:0017022 IPI myosin binding
GO:0031032 IDA actomyosin structure organization
GO:0046777 IDA protein autophosphorylation
GO:0046872 IEA metal ion binding
GO:0070266 ISS necroptotic process
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313478 TRPM7-001 protein_coding Homo_sapiens 0 7829
ENST00000558444 TRPM7-008 processed_transcript Homo_sapiens 0 351
ENST00000560284 TRPM7-006 retained_intron Homo_sapiens 0 894
ENST00000560516 TRPM7-009 retained_intron Homo_sapiens 0 503
ENST00000560638 TRPM7-004 protein_coding Homo_sapiens 0 2248
ENST00000560849 TRPM7-007 processed_transcript Homo_sapiens 0 217
ENST00000560955 TRPM7-002 protein_coding Homo_sapiens 0 7792
ENST00000561267 TRPM7-010 protein_coding Homo_sapiens 0 802
ENST00000561443 TRPM7-005 processed_transcript Homo_sapiens 0 1219

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